RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TRIM2Q9C040 744 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 FN3KQ9H479 309 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 Q9N2J8 555 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 LSM2Q9Y333 95 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 SAGE2PA6NJ88 616 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 M0R129 80 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 RCBTB2O95199 551 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 HSMCR30P0CW71 290 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 DRD5P21918 477 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 CD40LGP29965 261 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 PPP1CAP62136 330 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 LSM3P62310 102 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 SNRPNP63162 240 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 OR1Q1Q15612 314 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 RGS21Q2M5E4 152 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 FLYWCH1Q4VC44 716 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ACSM5Q6NUN0 579 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ZNF550Q7Z398 422 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 WDR53Q7Z5U6 358 aaPredicted RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 KIF18BQ86Y91 864 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 NRMQ8IXM6 262 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 OR52L1Q8NGH7 329 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 MAP3K3Q99759 626 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 GPA33Q99795 319 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 FOLH1BQ9HBA9 442 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 CTPS2Q9NRF8 586 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 PRODH2Q9UF12 536 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 SLC7A7Q9UM01 511 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 SLC6A14Q9UN76 642 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 KRBA1A5PL33 1030 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 RHPN2P1A8MT19 583 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 KPNA4O00629 521 aaPredicted RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 FRS3O43559 492 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 KCNK2O95069 426 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 IGFBP1P08833 259 aaPredicted RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 BMP7P18075 431 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 S100A5P33763 92 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 MTNR1AP48039 350 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 PRKCDQ05655 676 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 TSTQ16762 297 aaKnown RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 HMGN2P46Q86SG4 172 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 GID4Q8IVV7 300 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 NKAIN4Q8IVV8 208 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 FAM160A2Q8N612 972 aaPredicted RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 IQCF1Q8N6M8 205 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 ANKK1Q8NFD2 765 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 TMEM239Q8WW34 195 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 CCNL2Q96S94 520 aaPredicted RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 H2AFY2Q9P0M6 372 aaPredicted RBP12.6□□□□□ -0.39
SMG6-203ENST00000536871 MED31Q9Y3C7 131 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 MMACHCQ9Y4U1 282 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 PEX16Q9Y5Y5 336 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 CCDC88CQ9P219 2028 aa12.6□□□□□ -0.39
SMG6-203ENST00000536871 A0A0A6YYC8 382 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 PNMA8CA0A1B0GUJ8 204 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 METTL15A6NJ78 407 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 I3L1I5 382 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 FOXS1O43638 330 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 DYRK3O43781 588 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CT62P0C5K7 136 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 GSTT2P0CG29 244 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 GSTT2BP0CG30 244 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 S1PR1P21453 382 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 GRK5P34947 590 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 GABRA4P48169 554 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ZNF141Q15928 474 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 DEFB110Q30KQ9 67 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 PGGHGQ32M88 737 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 WDR45BQ5MNZ6 344 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 NXNL2Q5VZ03 156 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 TMPRSS11FQ6ZWK6 438 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 SFTPA2Q8IWL1 248 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 PIK3R3Q92569 461 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 OPALINQ96PE5 141 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 JAM3Q9BX67 310 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 DSN1Q9H410 356 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 EGLN3Q9H6Z9 239 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 STARD5Q9NSY2 213 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 TMEM74BQ9NUR3 256 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 SOHLH2Q9NX45 425 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 STK25O00506 426 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 SURF4O15260 269 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 TPD52L2O43399 206 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms