RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	TBK1	Q9UHD2	729 aa		4.21	□□□□□ -1.74
PRKDC-208	ENST00000536710	WDR45	Q9Y484	360 aa		4.21	□□□□□ -1.74
PRKDC-208	ENST00000536710	MET	P08581	1390 aa		4.21	□□□□□ -1.74
PRKDC-208	ENST00000536710	SNED1	Q8TER0	1413 aa		4.21	□□□□□ -1.74
PRKDC-208	ENST00000536710	FER1L5	A0AVI2	2057 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR6C65	A6NJZ3	312 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710		A8MX80	341 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	EFNA2	O43921	213 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	NOL4	O94818	638 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	RHOBTB1	O94844	696 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	GJB5	O95377	273 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC2A10	O95528	541 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	ADCY5	O95622	1261 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	OPN1LW	P04000	364 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	IGF1	P05019	195 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	CT45A10	P0DMU9	189 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	UQCRC2	P22695	453 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	FNTA	P49354	379 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	PLA2G16	P53816	162 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	RPL8	P62917	257 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	SERTAD2	Q14140	314 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	LPAL2	Q16609	132 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	CCDC152	Q4G0S7	254 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	ATF7IP2	Q5U623	682 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	STAC2	Q6ZMT1	411 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710		Q8N9G6	341 aa	Predicted RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	STXBP6	Q8NFX7	210 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	RHOXF1	Q8NHV9	184 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	FBXO30	Q8TB52	745 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	TRUB1	Q8WWH5	349 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	ZSCAN5A	Q9BUG6	496 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	TM2D1	Q9BX74	207 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	POLR1E	Q9GZS1	481 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	GNG12	Q9UBI6	72 aa		4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	XPO7	Q9UIA9	1087 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	MRPS33	Q9Y291	106 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	DDX49	Q9Y6V7	483 aa	Known RBP	4.2	□□□□□ -1.74
PRKDC-208	ENST00000536710	ESYT2	A0FGR8	921 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	SAGE2P	A6NJ88	616 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	SRRM5	B3KS81	715 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	GPRIN2	O60269	458 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	B3GAT3	O94766	335 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	IQCF3	P0C7M6	154 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC35E2	P0CK97	266 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	PGAM2	P15259	253 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	NF2	P35240	595 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	GBX2	P52951	348 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	OTUD4	Q01804	1114 aa	Known RBP	4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	TIMM50	Q3ZCQ8	353 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	CASC1	Q6TDU7	716 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	GCNT7	Q6ZNI0	430 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	APTX	Q7Z2E3	356 aa	Known RBP	4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	VASH2	Q86V25	355 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	SERINC5	Q86VE9	423 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	LRRC43	Q8N309	656 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	CSNK1A1L	Q8N752	337 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	RPL3L	Q92901	407 aa	Known RBP	4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR5M11	Q96RB7	305 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	CCT8L2	Q96SF2	557 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	RIT2	Q99578	217 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	CRACR2A	Q9BSW2	395 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	ELOVL4	Q9GZR5	314 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	GLT8D2	Q9H1C3	349 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	EHF	Q9NZC4	300 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710	ALG6	Q9Y672	507 aa		4.19	□□□□□ -1.74
PRKDC-208	ENST00000536710		A0A087WWV3	80 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	FCN1	O00602	326 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	TPST2	O60704	377 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	ZNF354A	O60765	605 aa	Predicted RBP	4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	F10	P00742	488 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	CPN1	P15169	458 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	GATA1	P15976	413 aa	Predicted RBP	4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	NT5E	P21589	574 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	GLRA2	P23416	452 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	SPIB	Q01892	262 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	PAX2	Q02962	417 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	ZNF154	Q13106	437 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	LRRC23	Q53EV4	343 aa	Predicted RBP	4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	TTC23	Q5W5X9	447 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	PYHIN1	Q6K0P9	492 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR52M1	Q8NGK5	317 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR2T3	Q8NH03	318 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	CCDC26	Q8TAB7	109 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	ADAMTS16	Q8TE57	1224 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	IL1F10	Q8WWZ1	152 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	RLN3	Q8WXF3	142 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	TMEM80	Q96HE8	168 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	RANBP9	Q96S59	729 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	OMD	Q99983	421 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	TSSK1B	Q9BXA7	367 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	DUSP16	Q9BY84	665 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	NXF5	Q9H1B4	397 aa	Known RBP	4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	GORASP2	Q9H8Y8	452 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	MIEF1	Q9NQG6	463 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	PNO1	Q9NRX1	252 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms