RNA–Protein interactions for RNA: ENST00000536445.5

POLE-209, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-209	ENST00000536445	RPS21	P63220	83 aa	Known RBP	13.13	□□□□□ -0.31
POLE-209	ENST00000536445	RPL6	Q02878	288 aa	Known RBP	13.13	□□□□□ -0.31
POLE-209	ENST00000536445	DPT	Q07507	201 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	LIPJ	Q5W064	366 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	TMEM220	Q6QAJ8	160 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	UNC5D	Q6UXZ4	953 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	ZNF765	Q7L2R6	523 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.13	□□□□□ -0.31
POLE-209	ENST00000536445	KCT2	Q8NC54	265 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	ZNF582	Q96NG8	517 aa	Predicted RBP	13.13	□□□□□ -0.31
POLE-209	ENST00000536445	ACTR6	Q9GZN1	396 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	MCCC2	Q9HCC0	563 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	MBNL1	Q9NR56	388 aa	Known RBP	13.13	□□□□□ -0.31
POLE-209	ENST00000536445	DNAJC11	Q9NVH1	559 aa		13.13	□□□□□ -0.31
POLE-209	ENST00000536445	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	MGAT4D	A6NG13	374 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	FFAR1	O14842	300 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	CHST10	O43529	356 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SLC28A2	O43868	658 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	LDOC1	O95751	146 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	TP53	P04637	393 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	C8G	P07360	202 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	UGT2B7	P16662	529 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ELAVL4	P26378	380 aa	Known RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	PBLD	P30039	288 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	PITPNB	P48739	271 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	CHIT1	Q13231	466 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	FGL2	Q14314	439 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ZNF169	Q14929	603 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SEC23B	Q15437	767 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	KCTD12	Q96CX2	325 aa	Known RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	GIMAP5	Q96F15	307 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SLC38A2	Q96QD8	506 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	PKP4	Q99569	1192 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SLC12A9	Q9BXP2	914 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	RNF32	Q9H0A6	362 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	OR51B5	Q9H339	312 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	IMP3	Q9NV31	184 aa	Known RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	POMT2	Q9UKY4	750 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	MRPS17	Q9Y2R5	130 aa	Known RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	CKAP5	Q14008	2032 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SLC22A23	A1A5C7	686 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	LANCL1	O43813	399 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	NCR1	O76036	304 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	IGFBP1	P08833	259 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ANXA4	P09525	319 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ARAF	P10398	606 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ITPKA	P23677	461 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	ACSL1	P33121	698 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	GAS1	P54826	345 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	HBA1	P69905	142 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	TAP2	Q03519	686 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	C2orf80	Q0P641	193 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	NDUFA9	Q16795	377 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	RASSF6	Q6ZTQ3	369 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	IKBIP	Q70UQ0	350 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	UBE2R2	Q712K3	238 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	KRT74	Q7RTS7	529 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	MARCH9	Q86YJ5	346 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	FTMT	Q8N4E7	242 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	OR2T35	Q8NGX2	323 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	SLC17A9	Q9BYT1	436 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	OSGEPL1	Q9H4B0	414 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	POLM	Q9NP87	494 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-209	ENST00000536445	WNT16	Q9UBV4	365 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	PFDN2	Q9UHV9	154 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	OR1A2	Q9Y585	309 aa		13.12	□□□□□ -0.31
POLE-209	ENST00000536445	GABRP	O00591	440 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PRODH	O43272	600 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PTP4A3	O75365	173 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	RECK	O95980	971 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	LIM2	P55344	173 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	AP1S2	P56377	157 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	SMIM11A	P58511	58 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PPP2CB	P62714	309 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PPP2CA	P67775	309 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	CRYZ	Q08257	329 aa	Known RBP	13.11	□□□□□ -0.31
POLE-209	ENST00000536445	GSG1	Q2KHT4	349 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PGBD2	Q6P3X8	592 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	LRFN4	Q6PJG9	635 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	C3P1	Q6ZMU1	363 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	OAF	Q86UD1	273 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	TRAPPC5	Q8IUR0	188 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	WDR20	Q8TBZ3	569 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	LGR4	Q9BXB1	951 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	BRF2	Q9HAW0	419 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-209	ENST00000536445	ASB6	Q9NWX5	421 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PPIE	Q9UNP9	301 aa	Known RBP	13.11	□□□□□ -0.31
POLE-209	ENST00000536445	CLCA2	Q9UQC9	943 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	SLC22A14	Q9Y267	594 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PRKAB1	Q9Y478	270 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	LOC105369274	A0A096LPK9	316 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	TMEM202	A6NGA9	273 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	CACNB4	O00305	520 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-209	ENST00000536445	SGTA	O43765	313 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	SSNA1	O43805	119 aa		13.11	□□□□□ -0.31
POLE-209	ENST00000536445	PRAMEF4	O60810	478 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms