RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GSTA1P08263 222 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PSMB1P20618 241 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IMPDH1P20839 514 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SLC6A8P48029 635 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HSPB3Q12988 150 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CTU2Q2VPK5 515 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HEPHL1Q6MZM0 1159 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HMBOX1Q6NT76 420 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PODNL1Q6PEZ8 512 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SYT10Q6XYQ8 523 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IKBIPQ70UQ0 350 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 GALNT10Q86SR1 603 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 LCA5Q86VQ0 697 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RELL1Q8IUW5 271 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 GTPBP8Q8N3Z3 284 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MAPK1IP1LQ8NDC0 245 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ZFP28Q8NHY6 868 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PIK3R3Q92569 461 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ELP4Q96EB1 424 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 AMDHD1Q96NU7 426 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 KCNA7Q96RP8 456 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HDHD5Q9BXW7 423 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 TMEM185BQ9H7F4 350 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MID1IP1Q9NPA3 183 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MYNNQ9NPC7 610 aa11.6□□□□□ -0.55
TNFRSF1A-207ENST00000535958 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RTTNQ86VV8 2226 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IGLV3-32A0A0A0MS00 114 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SCDO00767 359 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PDPK1O15530 556 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 DLX3O60479 287 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 OPN1LWP04000 364 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SBK3P0C264 359 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CTAGE8P0CG41 777 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PRPS2P11908 318 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IL11P20809 199 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 AGTR1P30556 359 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PRKAG1P54619 331 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RAC1P63000 192 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SLC29A2Q14542 456 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 UBAP2Q5T6F2 1119 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 EXOC3L1Q86VI1 746 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MISPQ8IVT2 679 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CTAGE4Q8IX94 777 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 GATSQ8NAP1 163 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CEP70Q8NHQ1 597 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 IGFBPL1Q8WX77 278 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 S100PBPQ96BU1 408 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CHMP6Q96FZ7 201 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SH3YL1Q96HL8 342 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 KLHL15Q96M94 604 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 REG4Q9BYZ8 158 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 FAIMQ9NVQ4 179 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SIRT5Q9NXA8 310 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 TMEM216Q9P0N5 145 aa11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 WBP11Q9Y2W2 641 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-207ENST00000535958 A0A1W2PRB8 838 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GXYLT2A0PJZ3 443 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GJE1A6NN92 205 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ALG1L2C9J202 215 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 TLX2O43763 284 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PSMG1O95456 288 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 OXSR1O95747 527 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NUDT14O95848 222 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 IFI6P09912 130 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SFTPDP35247 375 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CDKN1AP38936 164 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PRKAA2P54646 552 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SLC18A2Q05940 514 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FAPQ12884 760 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 RNPS1Q15287 305 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 TMEM44Q2T9K0 475 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GLE1Q53GS7 698 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CPTPQ5TA50 214 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZNF619Q8N2I2 560 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 BANPQ8N9N5 519 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CDRT4Q8N9R6 151 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FAM76AQ8TAV0 307 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FBXO30Q8TB52 745 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SMAP2Q8WU79 429 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 JADE3Q92613 823 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CCDC126Q96EE4 140 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 L3HYPDHQ96EM0 354 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 MS4A4EQ96PG1 132 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 BARX1Q9HBU1 254 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 YAE1D1Q9NRH1 226 aa11.58□□□□□ -0.56
TNFRSF1A-207ENST00000535958 MED17Q9NVC6 651 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms