RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DUSP22Q9NRW4 184 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 SNPHO15079 494 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 UBXN7O94888 489 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 OR5F1O95221 314 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 THBS1P07996 1170 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GKN3PP0CG01 181 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GNSP15586 552 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 RPS4Y1P22090 263 aaKnown RBP12.43□□□□□ -0.42
VPS33B-202ENST00000535906 TNFSF8P32971 234 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 MAP3K8P41279 467 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 RORCP51449 518 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GAS1P54826 345 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 SELENBP1Q13228 472 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 DESI1Q6ICB0 168 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 NCCRP1Q6ZVX7 275 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-202ENST00000535906 PHC2Q8IXK0 858 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GALNT12Q8IXK2 581 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 TRMT61AQ96FX7 289 aaKnown RBP12.43□□□□□ -0.42
VPS33B-202ENST00000535906 RBCK1Q9BYM8 510 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 BARHL1Q9BZE3 327 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 MIR1-1HGQ9H1L0 117 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 CACYBPQ9HB71 228 aaKnown RBP12.43□□□□□ -0.42
VPS33B-202ENST00000535906 SATB2Q9UPW6 733 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 IGHV1OR15-9A0A0B4J2B8 117 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 GXYLT2A0PJZ3 443 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 SLC9B1P1A6NJY1 282 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 KLF4O43474 513 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CHST10O43529 356 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 APOL3O95236 402 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 WNT1P04628 370 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 SRFP11831 508 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 FPR3P25089 353 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 TPTEP56180 551 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 RAB38P57729 211 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 MRPL2Q5T653 305 aaKnown RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 SLC30A6Q6NXT4 461 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 MBOAT2Q6ZWT7 520 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 GDPD3Q7L5L3 318 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 C19orf47Q8N9M1 422 aaKnown RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 POGLUT1Q8NBL1 392 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 STACQ99469 402 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 LMAN1LQ9HAT1 526 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 IL20Q9NYY1 176 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 IL20RAQ9UHF4 553 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 SSR3Q9UNL2 185 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CARD8Q9Y2G2 431 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 VCANP13611 3396 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 WWP2O00308 870 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CDC42EP2O14613 210 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CH25HO95992 272 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 NID1P14543 1247 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 HTR2AP28223 471 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 GABRA3P34903 492 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 ETV5P41161 510 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 ETV1P50549 477 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 KLHL22Q53GT1 634 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 EIPR1Q53HC9 387 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 LIPKQ5VXJ0 399 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 MCATQ8IVS2 390 aaKnown RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 OR4Q3Q8NH05 313 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 ARSGQ96EG1 525 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 PRSS27Q9BQR3 290 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 CAPN10Q9HC96 672 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 MRPS18AQ9NVS2 196 aaKnown RBP12.42□□□□□ -0.42
VPS33B-202ENST00000535906 ERVK13-1Q9NX77 482 aa12.42□□□□□ -0.42
VPS33B-202ENST00000535906 A0A0A6YYC8 382 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 I3L1I5 382 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CBX7O95931 251 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 APOA1P02647 267 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CPEP16870 476 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 BMP8BP34820 402 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 C3orf38Q5JPI3 329 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ZCCHC12Q6PEW1 402 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ZC3H14Q6PJT7 736 aaKnown RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ZAR1Q86SH2 424 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 AKAP14Q86UN6 197 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 MAP3K3Q99759 626 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 PHF7Q9BWX1 381 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 SNTG1Q9NSN8 517 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CA14Q9ULX7 337 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 IRGMA1A4Y4 181 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CDHR4A6H8M9 788 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CHURC1-FNTBB4DL54 471 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 RGS5O15539 181 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 PRODHO43272 600 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 SLC35E2P0CK97 266 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 MAOBP27338 520 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 STAT5AP42229 794 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 BNC1Q01954 994 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms