RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 SIT1Q9Y3P8 196 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 A0A1W2PQF6 199 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 M0R3H8 397 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TSPAN4O14817 238 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 SLC28A2O43868 658 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 BNIP3LO60238 219 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 RGS9O75916 674 aaPredicted RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 UBXN7O94888 489 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MPC2O95563 127 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TCRBP04435 133 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 C1GALT1C1LP0DN25 315 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TFPIP10646 304 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 CXCL3P19876 107 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 DNASE1P24855 282 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 PREPP48147 710 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MANFP55145 182 aaKnown RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 CDH11P55287 796 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TBPL1P62380 186 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TSTA3Q13630 321 aaPredicted RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 INSL4Q14641 139 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TMEM44Q2T9K0 475 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 GARNL3Q5VVW2 1013 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TMEM91Q6ZNR0 172 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 C6orf120Q7Z4R8 191 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MRGPREQ86SM8 312 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MMP21Q8N119 569 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 OR8K5Q8NH50 307 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 OR52N1Q8NH53 320 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 CEP76Q8TAP6 659 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 RBPMSQ93062 196 aaKnown RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 PPP1R16AQ96I34 528 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 RBP7Q96R05 134 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 SECISBP2Q96T21 854 aaKnown RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 GPA33Q99795 319 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 GABRG3Q99928 467 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 TREX2Q9BQ50 279 aaPredicted RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 LYARQ9NX58 379 aaKnown RBP8.33□□□□□ -1.08
SORL1-213ENST00000534754 COPZ2Q9P299 210 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 B4GALT6Q9UBX8 382 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 SLC25A13Q9UJS0 675 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MAB21L2Q9Y586 359 aa8.33□□□□□ -1.08
SORL1-213ENST00000534754 MEIKINA0A087WXM9 373 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 TUBAL3A6NHL2 446 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 A8MUA0 341 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 HMGN4O00479 90 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 NPC1O15118 1278 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 EIF4EP06730 217 aaKnown RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 SSTR2P30874 369 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 NTSR1P30989 418 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 MMP12P39900 470 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 VASPP50552 380 aaPredicted RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 MRPS21P82921 87 aaKnown RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 PUDPQ08623 228 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 CAMK2DQ13557 499 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 HNRNPA1L2Q32P51 320 aaKnown RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 ZNF791Q3KP31 576 aaPredicted RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 EOGTQ5NDL2 527 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 FAM180BQ6P0A1 224 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 B3GLCTQ6Y288 498 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 OAFQ86UD1 273 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 TBC1D19Q8N5T2 526 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 SAMD12Q8N8I0 201 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 TMEM105Q8N8V8 129 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 CHST14Q8NCH0 376 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 FBXO15Q8NCQ5 510 aaPredicted RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 MORN4Q8NDC4 146 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 OR4F15Q8NGB8 312 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 ZNF578Q96N58 590 aaPredicted RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 EGLN3Q9H6Z9 239 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 ERVMER34-1Q9H9K5 563 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 MAN2C1Q9NTJ4 1040 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 PTGFRNQ9P2B2 879 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 MMP17Q9ULZ9 603 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 ZFR2Q9UPR6 939 aaKnown RBP8.32□□□□□ -1.08
SORL1-213ENST00000534754 CACNA1HO95180 2353 aa8.32□□□□□ -1.08
SORL1-213ENST00000534754 LOC105369274A0A096LPK9 316 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 A0A1W2PPL8 197 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 ATP6V1G2-DDX39BF2Z307 99 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 GPR171O14626 319 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 TSPAN6O43657 245 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 CTSLP07711 333 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 HOXD4P09016 255 aaPredicted RBP8.31□□□□□ -1.08
SORL1-213ENST00000534754 HOXB2P14652 356 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 NPPBP16860 134 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 NPR2P20594 1047 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 IFNGR2P38484 337 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 GBX2P52951 348 aaPredicted RBP8.31□□□□□ -1.08
SORL1-213ENST00000534754 METAP1P53582 386 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 LRRC73Q5JTD7 316 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 C9orf64Q5T6V5 341 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 PYHIN1Q6K0P9 492 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 NUDT18Q6ZVK8 323 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 FGD2Q7Z6J4 655 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 CACUL1Q86Y37 369 aa8.31□□□□□ -1.08
SORL1-213ENST00000534754 GPR135Q8IZ08 494 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms