RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	LSM1	O15116	133 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SNAP29	O95721	258 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	OSM	P13725	252 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	BAIAP2L2	Q6UXY1	529 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	LINC00696	Q6ZRV3	163 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SMIM14	Q96QK8	99 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	POTEKP	Q9BYX7	375 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ACPT	Q9BZG2	426 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	OR10A5	Q9H207	317 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	OR10A2	Q9H208	303 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	EPHX3	Q9H6B9	360 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CD93	Q9NPY3	652 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MRPS2	Q9Y399	296 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PRRC2B	Q5JSZ5	2229 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NWD2	Q9ULI1	1742 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NPIPA5	A0A0B4J1W7	369 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NPIPA7	E9PJI5	369 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CXCL10	P02778	98 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	LCK	P06239	509 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NPIPA8	P0DM63	369 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PITPNB	P48739	271 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ARSK	Q6UWY0	536 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CNIH3	Q8TBE1	160 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MEPE	Q9NQ76	525 aa	Predicted RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	KLHL13	Q9P2N7	655 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	EXTL2	Q9UBQ6	330 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	EDAR	Q9UNE0	448 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PCDHGA10	Q9Y5H3	936 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	RGPD5	Q99666	1765 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532		H7C417	338 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MPPED1	O15442	326 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	UCHL1	P09936	223 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SPHAR	Q15513	63 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	RAB11B	Q15907	218 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CTSL3P	Q5NE16	218 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CCSAP	Q6IQ19	270 aa	Predicted RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PAPD4	Q6PIY7	484 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ESX1	Q8N693	406 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SLC25A44	Q96H78	314 aa	Predicted RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ZNF471	Q9BX82	626 aa	Predicted RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ACSS1	Q9NUB1	689 aa	Predicted RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	TMEM9	Q9P0T7	183 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SLC6A5	Q9Y345	797 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PET100	P0DJ07	73 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MAT1A	Q00266	395 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PLGLA	Q15195	96 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SFT2D3	Q587I9	215 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MISP	Q8IVT2	679 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	OR5D16	Q8NGK9	328 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MYADM	Q96S97	322 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	WDR83	Q9BRX9	315 aa	Known RBP	14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MMACHC	Q9Y4U1	282 aa		14.79	□□□□□ -0.04
NCAPD3-213	ENST00000534532	GPR39	O43194	453 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	RGS9	O75916	674 aa	Predicted RBP	14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	DCT	P40126	519 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MPP2	Q14168	576 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	GNMT	Q14749	295 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	C6orf141	Q5SZD1	244 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NKAIN2	Q5VXU1	208 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SYT14	Q8NB59	555 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	OR5AK2	Q8NH90	309 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ZDHHC5	Q9C0B5	715 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SLC6A17	Q9H1V8	727 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ABCG2	Q9UNQ0	655 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ALG5	Q9Y673	324 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	HSPE1-MOB4	S4R3N1	261 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	LRRTM2	O43300	516 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SNN	O75324	88 aa	Predicted RBP	14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PSPH	P78330	225 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PIN1	Q13526	163 aa	Predicted RBP	14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CPZ	Q66K79	652 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ZNF554	Q86TJ5	538 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	CNTN4	Q8IWV2	1026 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PLPP6	Q8IY26	295 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SPEM1	Q8N4L4	309 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	RET	P07949	1114 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	STOM	P27105	288 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SGSH	P51688	502 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	GTDC1	Q4AE62	458 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	NADK2	Q4G0N4	442 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PDSS2	Q86YH6	399 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	RAB39B	Q96DA2	213 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	IER3IP1	Q9Y5U9	82 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	FXYD6-FXYD2	A0A087WZ82	144 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	GABRR3	A8MPY1	467 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	HTR3B	O95264	441 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	HMGA1	P17096	107 aa	Known RBP	14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	SLC26A5	P58743	744 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	GRK1	Q15835	563 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	LCN8	Q6JVE9	175 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ULBP2	Q9BZM5	246 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	FXYD6	Q9H0Q3	95 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	WASH6P	Q9NQA3	447 aa		14.78	□□□□□ -0.04
NCAPD3-213	ENST00000534532	IGHG1	P01857	330 aa		14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	MAS1	P04201	325 aa		14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PBX2	P40425	430 aa		14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	TNFRSF17	Q02223	184 aa		14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	AWAT2	Q6E213	333 aa		14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	PAPD5	Q8NDF8	572 aa	Known RBP	14.77	□□□□□ -0.04
NCAPD3-213	ENST00000534532	ADAMTS19	Q8TE59	1207 aa		14.77	□□□□□ -0.04

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms