RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 KIAA1549LQ6ZVL6 1849 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 GON4LQ3T8J9 2241 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 AKR1D1P51857 326 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF155Q12901 538 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 KLHL12Q53G59 568 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 ERN2Q76MJ5 926 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 OR4N5Q8IXE1 308 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SIRT6Q8N6T7 355 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 DNAJC5GQ8N7S2 189 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 C12orf76Q8N812 135 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 PIGXQ8TBF5 258 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 MENTQ9BUN1 341 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 FAIM2Q9BWQ8 316 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SLC38A1Q9H2H9 487 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 EXTL2Q9UBQ6 330 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 TBX21Q9UL17 535 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 MAFFQ9ULX9 164 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 LANCL1O43813 399 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 PAK4O96013 591 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 ELK1P19419 428 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 EVX1P49640 407 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 TRAM2Q15035 370 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 MLF2Q15773 248 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 RNLSQ5VYX0 342 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 METRNLQ641Q3 311 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 MZT2BQ6NZ67 158 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 PLBD1Q6P4A8 553 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 CD300LDQ6UXZ3 194 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 NR2C2APQ86WQ0 139 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 CHST2Q9Y4C5 530 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 MDC1Q14676 2089 aaKnown RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 FAM25EA8MYX2 175 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 BTN3A3O00478 584 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 CDC42EP2O14613 210 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 FCER2P06734 321 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 TSPAN31Q12999 210 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 CCNJQ5T5M9 372 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 NUP43Q8NFH3 380 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 SMG7Q92540 1137 aaKnown RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 MCHR1Q99705 422 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 HINT3Q9NQE9 182 aaKnown RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 SIRT4Q9Y6E7 314 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-226ENST00000533820 COL4A3Q01955 1670 aa18.06■□□□□ 0.48
CAPN1-226ENST00000533820 TBC1D3BA6NDS4 549 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 REM1O75628 298 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 HLA-DPB1P04440 258 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 IFNA16P05015 189 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 MRPL3P09001 348 aaKnown RBP18.05■□□□□ 0.48
CAPN1-226ENST00000533820 CPN2P22792 545 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 PDX1P52945 283 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 SNRPNP63162 240 aaKnown RBP18.05■□□□□ 0.48
CAPN1-226ENST00000533820 ELAVL3Q14576 367 aaKnown RBP18.05■□□□□ 0.48
CAPN1-226ENST00000533820 POU4F3Q15319 338 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 GPR68Q15743 365 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 KLHL36Q8N4N3 616 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 IL17RCQ8NAC3 791 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 OR2A1Q8NGT9 310 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 PHF21AQ96BD5 680 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 PROS1P07225 676 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 OMPP47874 163 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 CENPAP49450 140 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 FAM209BQ5JX69 171 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 KRT74Q7RTS7 529 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 TIGD4Q8IY51 512 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 SLC16A11Q8NCK7 471 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 TNFRSF10DQ9UBN6 386 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
CAPN1-226ENST00000533820 TRAV6A0A075B6T7 132 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 CENPVL1A0A0U1RR11 272 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 TRDV1A0A1B0GX56 115 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 A0A1W2PPK0 400 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 BET1O15155 118 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 AKAP8O43823 692 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ZIC2O95409 532 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 HIST1H1TP22492 207 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 RPL35P42766 123 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 GCGRP47871 477 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 RPS7P62081 194 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 PRDX1Q06830 199 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 DPTQ07507 201 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF767PQ75MW2 155 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 OR8K3Q8NH51 312 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 DIO2Q92813 273 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 MED18Q9BUE0 208 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 PINK1Q9BXM7 581 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ENKD1Q9H0I2 346 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 PPIL3Q9H2H8 161 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 GTPBP1O00178 669 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SURF4O15260 269 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 PEX14O75381 377 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 THY1P04216 161 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 RPN2P04844 631 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 TBXA2RP21731 343 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 AGFG1P52594 562 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ID2Q02363 134 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ST3GAL3Q11203 375 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 DEFB115Q30KQ5 88 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SLC25A30Q5SVS4 291 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ARL9Q6T311 187 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms