RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 AGPAT4Q9NRZ5 378 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 LIN7CQ9NUP9 197 aaKnown RBP5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 ASF1BQ9NVP2 202 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF223Q9UK11 482 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 UTS2RQ9UKP6 389 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 VPS4AQ9UN37 437 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 ERVK-19Q9WJR5 959 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 DLGAP4Q9Y2H0 992 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 YARS2Q9Y2Z4 477 aaKnown RBP5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 DNAJC15Q9Y5T4 150 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 PTGDR2Q9Y5Y4 395 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF780BQ9Y6R6 833 aa5.34□□□□□ -1.55
HMGB1P42-201ENST00000532126 SCN3AQ9NY46 2000 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NUP210LQ5VU65 1888 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 A0A1W2PS29 197 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM120BA0PK00 339 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM200CA6NKL6 621 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM114B3SHH9 223 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TCP11X1B4DZS4 312 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 H3BS24 57 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 J3KTA2 159 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 HRKO00198 91 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 WWP2O00308 870 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRKNO60260 465 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 HNRNPCL1O60812 293 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NOL3O60936 208 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC25A12O75746 678 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR2J2O76002 312 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NEURL1O76050 574 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 RASAL1O95294 804 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CRYABP02511 175 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 IGKV3-11P04433 115 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP1B1P05026 303 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SP1P08047 785 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 IL3P08700 152 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRPH2P23942 346 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ARRB2P32121 409 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 FEN1P39748 380 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SSR4P51571 173 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 HK2P52789 917 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 MAGOHP61326 146 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CD69Q07108 199 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C2orf80Q0P641 193 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CHI3L2Q15782 390 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF750Q32MQ0 723 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 UGT3A2Q3SY77 523 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 GALNTL6Q49A17 601 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C6orf163Q5TEZ5 329 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 HHATQ5VTY9 493 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NOXRED1Q6NXP6 359 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C16orf47Q6ZP98 133 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 RNF165Q6ZSG1 346 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC29A4Q7RTT9 530 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 GPALPP1Q8IXQ4 340 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 MMP21Q8N119 569 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 LRRC25Q8N386 305 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 BCORP1Q8N888 145 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM178AQ8NBL3 297 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 IL17RDQ8NFM7 739 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CDC26Q8NHZ8 85 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NUBPLQ8TB37 319 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 FBXO30Q8TB52 745 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 GRHL3Q8TE85 626 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C16orf78Q8WTQ4 265 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TWIST2Q8WVJ9 160 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAR1Q8WVX9 515 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM125Q96AQ2 219 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 EXOSC8Q96B26 276 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C11orf24Q96F05 449 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 METTL2AQ96IZ6 378 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SIGLEC12Q96PQ1 595 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 GAL3ST4Q96RP7 486 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CCT7Q99832 543 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SOX7Q9BT81 388 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C1orf21Q9H246 121 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC25A32Q9H2D1 315 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 MMADHCQ9H3L0 296 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TUBB1Q9H4B7 451 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TRIM45Q9H8W5 580 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 LIN28AQ9H9Z2 209 aaKnown RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CXorf21Q9HAI6 301 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 LRTM1Q9HBL6 345 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMBIM4Q9HC24 238 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 MIEF1Q9NQG6 463 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 KLHL1Q9NR64 748 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 OLAHQ9NV23 265 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 C1orf109Q9NX04 203 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 NKIRAS1Q9NYS0 192 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 EHD3Q9NZN3 535 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 HEY2Q9UBP5 337 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC25A10Q9UBX3 287 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 CES1P1Q9UKY3 287 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ERVK-11Q9UQG0 969 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ENTPD4Q9Y227 616 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 WBP11Q9Y2W2 641 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms