RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 C15orf41Q9Y2V0 281 aa13.2□□□□□ -0.3
CPSF1-206ENST00000531480 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
CPSF1-206ENST00000531480 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-206ENST00000531480 TENM4Q6N022 2769 aa13.2□□□□□ -0.3
CPSF1-206ENST00000531480 MYO18BQ8IUG5 2567 aa13.2□□□□□ -0.3
CPSF1-206ENST00000531480 RELNP78509 3460 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 ACOT7O00154 380 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 MRASO14807 208 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 CBR3O75828 277 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 H6PDO95479 791 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 HPNP05981 417 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 CHRM4P08173 479 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 ATP6V1C1P21283 382 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 DCTP40126 519 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 RFC3P40938 356 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 CRATP43155 626 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 RFX3P48380 749 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 PPIAP62937 165 aaKnown RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 KCNC4Q03721 635 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 BNIP1Q12981 228 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 NFYCQ13952 458 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 ADRM1Q16186 407 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 SYPL1Q16563 259 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 C8orf82Q6P1X6 216 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 NET1Q7Z628 596 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 PLCZ1Q86YW0 608 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 MISPQ8IVT2 679 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 METTL25Q8N6Q8 603 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 ANKFN1Q8N957 763 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 OR8J3Q8NGG0 315 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 SLC38A5Q8WUX1 472 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 LRRC58Q96CX6 371 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 GNRHR2Q96P88 292 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 TMEM38AQ9H6F2 299 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 SDHAF3Q9NRP4 125 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 P2RX2Q9UBL9 471 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 SUCOQ9UBS9 1254 aaKnown RBP13.19□□□□□ -0.3
CPSF1-206ENST00000531480 WDR45Q9Y484 360 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 GTF3C1Q12789 2109 aa13.19□□□□□ -0.3
CPSF1-206ENST00000531480 EVPLLA8MZ36 301 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 UGT2B17O75795 530 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 ANGPTL1O95841 491 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 NUDT7P0C024 238 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 ARAFP10398 606 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 MAGEA5P43359 124 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 CLK3P49761 638 aaKnown RBP13.18□□□□□ -0.3
CPSF1-206ENST00000531480 GZMMP51124 257 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 MXRA7P84157 204 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 C17orf67Q0P5P2 114 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 CD226Q15762 336 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 DNAL1Q4LDG9 190 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 MARCH3Q86UD3 253 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 ZNF619Q8N2I2 560 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 POU5F2Q8N7G0 328 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
CPSF1-206ENST00000531480 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 MMADHCQ9H3L0 296 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-206ENST00000531480 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 CALML5Q9NZT1 146 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 B4GALT7Q9UBV7 327 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-206ENST00000531480 MKLN1Q9UL63 735 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 DTNAQ9Y4J8 743 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
CPSF1-206ENST00000531480 CENPVL1A0A0U1RR11 272 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 CFAP73A6NFT4 308 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 C17orf51A8MQB3 221 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 FAM166BA8MTA8 275 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 SCDO00767 359 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 GNB5O14775 395 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 TFECO14948 347 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-206ENST00000531480 NDUFB5O43674 189 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 SCO2O43819 266 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 SUSD5O60279 629 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 HCN1O60741 890 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 DNAJA2O60884 412 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 ENDOUP21128 410 aaKnown RBP13.17□□□□□ -0.3
CPSF1-206ENST00000531480 SLC6A2P23975 617 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 MSX1P28360 303 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 MASP1P48740 699 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 CRISP3P54108 245 aa13.17□□□□□ -0.3
CPSF1-206ENST00000531480 CHRNEQ04844 493 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms