RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 SYNGR4O95473 234 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 IL3P08700 152 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 COL6A2P12110 1019 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 USF1P22415 310 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 IL32P24001 234 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 CFPP27918 469 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 ITGADQ13349 1161 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 HBMQ6B0K9 141 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 LETMD1Q6P1Q0 360 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 Q6ZSR9 355 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 RPS27LQ71UM5 84 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 BHLHA15Q7RTS1 189 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 TDRPQ86YL5 185 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 PLD6Q8N2A8 252 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 PPM1NQ8N819 430 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 PTGR2Q8N8N7 351 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 BANPQ8N9N5 519 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 OR4F6Q8NGB9 312 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 FAM168AQ92567 244 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 KISS1RQ969F8 398 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 EXOSC8Q96B26 276 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 MSI2Q96DH6 328 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 PRR14Q9BWN1 585 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 SRXN1Q9BYN0 137 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 POTEKPQ9BYX7 375 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 ELOVL6Q9H5J4 265 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 BRF2Q9HAW0 419 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 SLC35C2Q9NQQ7 365 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 CBLN4Q9NTU7 201 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 FAIMQ9NVQ4 179 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 KLHL13Q9P2N7 655 aa9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 C19orf53Q9UNZ5 99 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-210ENST00000530563 VWFP04275 2813 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 A0A087WV62 115 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 UQCRHLA0A096LP55 91 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 A0A1W2PRB8 838 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 UPK1AO00322 258 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 ABCD4O14678 606 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 PGM3O95394 542 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 CHN1P15882 459 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 EGR1P18146 543 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 MAP3K8P41279 467 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 GZMKP49863 264 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 MANFP55145 182 aaKnown RBP9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 CARD18P57730 90 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 ZNF155Q12901 538 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 DECR1Q16698 335 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 PLPPR5Q32ZL2 321 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 TECRLQ5HYJ1 363 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 SH2D4BQ5SQS7 431 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 TTC19Q6DKK2 380 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 FAM166AQ6J272 317 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 B3GLCTQ6Y288 498 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 Q6ZT83 130 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 CREG2Q8IUH2 290 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 CTAGE3PQ8IX95 158 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 SAMD14Q8IZD0 417 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 OR4C3Q8NH37 302 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 ACTRT2Q8TDY3 377 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 PHF21BQ96EK2 531 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 RNF145Q96MT1 663 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 DHRS9Q9BPW9 319 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 LMF2Q9BU23 707 aaKnown RBP9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 ADAM19Q9H013 955 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 TMEM185BQ9H7F4 350 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 GP6Q9HCN6 339 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 PFDN4Q9NQP4 134 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 MED17Q9NVC6 651 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 STOML1Q9UBI4 398 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 MCM8Q9UJA3 840 aa9.42□□□□□ -0.9
TM9SF1-210ENST00000530563 LOC100289279A0A1B0GTE1 492 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 GXYLT2A0PJZ3 443 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 STX16-NPEPL1H3BU86 382 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 STX16O14662 325 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 EIF3HO15372 352 aaKnown RBP eCLIP9.41□□□□□ -0.95e-6■■■□□ 14.9
TM9SF1-210ENST00000530563 DLX3O60479 287 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 LYZL6O75951 148 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 LY6HO94772 140 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 YES1P07947 543 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 GSTA2P09210 222 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 MPIP34949 423 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 OR3A2P47893 321 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 CLK3P49761 638 aaKnown RBP9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 PPA1Q15181 289 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 RAB35Q15286 201 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 TCHHL1Q5QJ38 904 aaPredicted RBP9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 MROH9Q5TGP6 573 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 LIPNQ5VXI9 398 aa9.41□□□□□ -0.9
TM9SF1-210ENST00000530563 CCDC91Q7Z6B0 441 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms