RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	SYNDIG1L	A6NDD5	238 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	CCNB2	O95067	398 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	KRT75	O95678	551 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	ALAS2	P22557	587 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	TNFSF8	P32971	234 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	XCR1	P46094	333 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	PRIM2	P49643	509 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	CRISP3	P54108	245 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	CDH12	P55289	794 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	TAS2R50	P59544	299 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	SSX1	Q16384	188 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	PLAG1	Q6DJT9	500 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR52N2	Q8NGI0	321 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	GEMIN6	Q8WXD5	167 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	CLIP3	Q96DZ5	547 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	MMAB	Q96EY8	250 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	OPALIN	Q96PE5	141 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR5M11	Q96RB7	305 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	PIP5K1A	Q99755	562 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMEM38A	Q9H6F2	299 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	CLN6	Q9NWW5	311 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	NDOR1	Q9UHB4	597 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	PCNX2	A6NKB5	2137 aa		13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540	RIF1	Q5UIP0	2472 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-231	ENST00000529540		A0A0A6YYC8	382 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540		A0A0G2JN53	185 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	HMX3	A6NHT5	357 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	C4orf51	C9J302	202 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540		I3L1I5	382 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	CTDSP2	O14595	271 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	FOXS1	O43638	330 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	SSX4	O60224	188 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	TBX19	O60806	448 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	GPX5	O75715	221 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	SCG5	P05408	212 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	RNH1	P13489	461 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	DDC	P20711	480 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	PPP2R1B	P30154	601 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	EEF1A2	Q05639	463 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	DSG2	Q14126	1118 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	CRB2	Q5IJ48	1285 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	MEDAG	Q5VYS4	303 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	RNLS	Q5VYX0	342 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	FAM71E1	Q6IPT2	247 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	PWWP2B	Q6NUJ5	590 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	NANOGNB	Q7Z5D8	188 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	RAB43	Q86YS6	212 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR4A15	Q8NGL6	344 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR9A4	Q8NGU2	314 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	MAL2	Q969L2	176 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	ST6GAL2	Q96JF0	529 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR1F2P	Q96R84	312 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	SORBS1	Q9BX66	1292 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	REEP4	Q9H6H4	257 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	SLC25A19	Q9HC21	320 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZNF304	Q9HCX3	659 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	SEC14L4	Q9UDX3	406 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	LSM2	Q9Y333	95 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	MAP4K5	Q9Y4K4	846 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540		V9GYH0	126 aa		13.57	□□□□□ -0.24
NR1H3-231	ENST00000529540	PRAMEF25	A6NGN4	478 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMPRSS11D	O60235	418 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	IFNA14	P01570	189 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	GBA	P04062	536 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	KLK3	P07288	261 aa	Predicted RBP	13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CTSB	P07858	339 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ADRA2A	P08913	450 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CD63	P08962	238 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	HSMCR30	P0CW71	290 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	NR2F6	P10588	404 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CCL4	P13236	92 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CPN2	P22792	545 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	AQP1	P29972	269 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	RFX2	P48378	723 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	LIM2	P55344	173 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	RAB38	P57729	211 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	SNRPG	P62308	76 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TNFRSF17	Q02223	184 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	C2orf80	Q0P641	193 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	SCARB2	Q14108	478 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CDK10	Q15131	360 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZFP69	Q49AA0	526 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMEM201	Q5SNT2	666 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	NDUFAF5	Q5TEU4	345 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMPRSS7	Q7RTY8	843 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	SLC30A8	Q8IWU4	369 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ASCC1	Q8N9N2	400 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	CDC26	Q8NHZ8	85 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ASB15	Q8WXK1	588 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TM4SF18	Q96CE8	201 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	HHATL	Q9HCP6	504 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ACER3	Q9NUN7	267 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	TAS2R9	Q9NYW1	312 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	PISD	Q9UG56	409 aa		13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	MRPS2	Q9Y399	296 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-231	ENST00000529540	ASB4	Q9Y574	426 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms