RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 IRX1P78414 480 aaPredicted RBP10.92□□□□□ -0.66
SRPRA-202ENST00000527817 RUNX1T1Q06455 604 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 ZNF155Q12901 538 aaPredicted RBP10.92□□□□□ -0.66
SRPRA-202ENST00000527817 CALCOCO2Q13137 446 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 HEPACAMQ14CZ8 416 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 RNPS1Q15287 305 aaKnown RBP10.92□□□□□ -0.66
SRPRA-202ENST00000527817 TECRLQ5HYJ1 363 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 HBMQ6B0K9 141 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 SSX8Q7RTT4 187 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 NUFIP2Q7Z417 695 aaKnown RBP10.92□□□□□ -0.66
SRPRA-202ENST00000527817 ACTRT2Q8TDY3 377 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 FBF1Q8TES7 1133 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 PROX1Q92786 737 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 BBS4Q96RK4 519 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 ERP44Q9BS26 406 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 GP6Q9HCN6 339 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 Q9N2J8 555 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 SENP1Q9P0U3 644 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 NFU1Q9UMS0 254 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 VDAC3Q9Y277 283 aa10.92□□□□□ -0.66
SRPRA-202ENST00000527817 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 TTC36A6NLP5 189 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 MYO1GB0I1T2 1018 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 GOLGA8RI6L899 631 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 PPP6CO00743 305 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 WIPF1O43516 503 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 PSMG1O95456 288 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 OPN1LWP04000 364 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 IGHV4-31P0DP07 118 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 TYK2P29597 1187 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 STX2P32856 288 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 RAE1P78406 368 aaKnown RBP10.91□□□□□ -0.66
SRPRA-202ENST00000527817 RAB35Q15286 201 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 LIPNQ5VXI9 398 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 C11orf71Q6IPW1 123 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 LETMD1Q6P1Q0 360 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 TRABD2AQ86V40 505 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 CCDC25Q86WR0 208 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 TUSC5Q8IXB3 177 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 ZNF619Q8N2I2 560 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 ARIH2OSQ8N7S6 290 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 C16orf78Q8WTQ4 265 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 ZBTB8AQ96BR9 441 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 REXO5Q96IC2 774 aaKnown RBP10.91□□□□□ -0.66
SRPRA-202ENST00000527817 RADILQ96JH8 1075 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 NPAS1Q99742 590 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 LMF2Q9BU23 707 aaKnown RBP10.91□□□□□ -0.66
SRPRA-202ENST00000527817 POTEKPQ9BYX7 375 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 L2HGDHQ9H9P8 463 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 C3orf14Q9HBI5 128 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 ZNF225Q9UK10 706 aa10.91□□□□□ -0.66
SRPRA-202ENST00000527817 A0A1W2PRB8 838 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 ZNF814B7Z6K7 855 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 ALG1L2C9J202 215 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 UPK1AO00322 258 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 UBFD1O14562 309 aaKnown RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 GMFGO60234 142 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 SMIM24O75264 130 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 PRKD3O94806 890 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 NTN1O95631 604 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 PGRP06401 933 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 YES1P07947 543 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 NGFRP08138 427 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 ME2P23368 584 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 TTKP33981 857 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 MAGEA4P43358 317 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 MANFP55145 182 aaKnown RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 CDH11P55287 796 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 LSM11P83369 360 aaKnown RBP eCLIP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 PPA1Q15181 289 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 ZNHIT3Q15649 155 aaPredicted RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 GRAMD1BQ3KR37 738 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 Q6ZSR9 355 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 TDRPQ86YL5 185 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 PLD6Q8N2A8 252 aaKnown RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 OR2L13Q8N349 312 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 BANPQ8N9N5 519 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 RNF128Q8TEB7 428 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 ZNF483Q8TF39 744 aaPredicted RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 FAM168AQ92567 244 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 MUCL1Q96DR8 90 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 RNF145Q96MT1 663 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 CACNG6Q9BXT2 260 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 TIGARQ9NQ88 270 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 MED17Q9NVC6 651 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 TAS2R7Q9NYW3 318 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 KLHL13Q9P2N7 655 aa10.9□□□□□ -0.66
SRPRA-202ENST00000527817 DMGDHQ9UI17 866 aaKnown RBP10.9□□□□□ -0.66
SRPRA-202ENST00000527817 GNG14A0A1W2PPG7 69 aa10.89□□□□□ -0.67
SRPRA-202ENST00000527817 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
SRPRA-202ENST00000527817 MANBAO00462 879 aa10.89□□□□□ -0.67
SRPRA-202ENST00000527817 NDUFB5O43674 189 aa10.89□□□□□ -0.67
SRPRA-202ENST00000527817 PCDH7O60245 1069 aa10.89□□□□□ -0.67
SRPRA-202ENST00000527817 KCNH1O95259 989 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms