RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IGLV3-32A0A0A0MS00 114 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 SIAH2O43255 324 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 NKX2-2O95096 273 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 KRT4P19013 534 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 PRPH2P23942 346 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 OCRLQ01968 901 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 CLEC9AQ6UXN8 241 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 C10orf107Q8IVU9 208 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 CHMP6Q96FZ7 201 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 CCL19Q99731 98 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 CCT7Q99832 543 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 MID2Q9UJV3 735 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 CLEC4AQ9UMR7 237 aa20.1■□□□□ 0.81
TRAPPC4-208ENST00000527680 A0A087WZY1 265 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 ALG1L2C9J202 215 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 SYNGR4O95473 234 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 OXSR1O95747 527 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 ALOX5P09917 674 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZNF41P51814 821 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 RPL38P63173 70 aaKnown RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 GALNTL6Q49A17 601 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 RFTN2Q52LD8 501 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZNF385BQ569K4 471 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 Q5PR19 223 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 Q6ZSR9 355 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 C4orf33Q8N1A6 199 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 SLC16A11Q8NCK7 471 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 JADE3Q92613 823 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 SH3YL1Q96HL8 342 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 PIP5K1AQ99755 562 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 MCTS1Q9ULC4 181 aaKnown RBP20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 DSCAMO60469 2012 aa20.09■□□□□ 0.81
TRAPPC4-208ENST00000527680 KCNK2O95069 426 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 ACP2P11117 423 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 NEFHP12036 1026 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 SDC1P18827 310 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 EFNA1P20827 205 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 SLC6A8P48029 635 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 SLC18A2Q05940 514 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 TMEM44Q2T9K0 475 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 CPTPQ5TA50 214 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 GGNQ86UU5 652 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 KRTAP1-3Q8IUG1 177 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 DDIASQ8IXT1 998 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 COX18Q8N8Q8 333 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 OR6Y1Q8NGX8 325 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 OR2T11Q8NH01 316 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 OR10D3Q8NH80 312 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 C16orf58Q96GQ5 468 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 MS4A4EQ96PG1 132 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 GATA5Q9BWX5 397 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 PPCSQ9HAB8 311 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 FANCFQ9NPI8 374 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 PLSCR4Q9NRQ2 329 aa20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 PAQR5Q9NXK6 330 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC4-208ENST00000527680 HEATR5AQ86XA9 2040 aa20.08■□□□□ 0.8
TRAPPC4-208ENST00000527680 NPIPB8E9PQR5 432 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 SCDO00767 359 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 CXCL13O43927 109 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 TRIM13O60858 407 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZNF17P17021 662 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 ME2P23368 584 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 CCKARP32238 428 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 MAP3K8P41279 467 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 SERPINB4P48594 390 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 DUSP5Q16690 384 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 TDRPQ86YL5 185 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 LRRC75A-AS1Q8N1F1 130 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 OR6K3Q8NGY3 331 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 EPS8L3Q8TE67 593 aaKnown RBP20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZBTB8AQ96BR9 441 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 OTUB1Q96FW1 271 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 GMPPAQ96IJ6 420 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 TMEM185BQ9H7F4 350 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 UBQLN4Q9NRR5 601 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 ACSS1Q9NUB1 689 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 TMED5Q9Y3A6 229 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 VPS13CQ709C8 3753 aa20.07■□□□□ 0.8
TRAPPC4-208ENST00000527680 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 A0A1W2PRB8 838 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 TLDC2A0PJX2 215 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 FAM171A2A8MVW0 826 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 TNFSF11O14788 317 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 TBX19O60806 448 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 DDX5P17844 614 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 ASMTP46597 345 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 PRIM2P49643 509 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 RAC1P63000 192 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 GUSBP1Q15486 140 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 PDSS1Q5T2R2 415 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 GTF2IRD2BQ6EKJ0 949 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 MFSD12Q6NUT3 480 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZCCHC12Q6PEW1 402 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 C22orf34Q6ZV56 151 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 R3HCC1LQ7Z5L2 792 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZAR1Q86SH2 424 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 GTF2IRD2Q86UP8 949 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 GTPBP8Q8N3Z3 284 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 FAM110BQ8TC76 370 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms