RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KRT84Q9NSB2 600 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 FAM86C1Q9NVL1 165 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 RLIMQ9NVW2 624 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 FAM118AQ9NWS6 357 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 TESQ9UGI8 421 aaKnown RBP18.93■□□□□ 0.62
SMCO4-203ENST00000526869 ENOPH1Q9UHY7 261 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 POFUT2Q9Y2G5 429 aa18.93■□□□□ 0.62
SMCO4-203ENST00000526869 TRBV4-1A0A0J9YWV2 114 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 MAGEA13PA6NCF6 341 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 SLC16A6O15403 523 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ADH7P40394 386 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 RFX3P48380 749 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 FOXL2P58012 376 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 TAS2R41P59536 307 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ST3GAL3Q11203 375 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 IL18R1Q13478 541 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ZIK1Q3SY52 487 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ANKRD34AQ69YU3 496 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF770Q6IQ21 691 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-203ENST00000526869 C6orf15Q6UXA7 325 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-203ENST00000526869 HSDL2Q6YN16 418 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF527Q8NB42 609 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 APCDD1LQ8NCL9 501 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 OR2Y1Q8NGV0 311 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 NUBPLQ8TB37 319 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 GAL3ST4Q96RP7 486 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 FEVQ99581 238 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 MCHR1Q99705 422 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 GABARAPL3Q9BY60 117 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 FAM117AQ9C073 453 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 UBQLN4Q9NRR5 601 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 MAN2C1Q9NTJ4 1040 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 UBAP1Q9NZ09 502 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 RHCGQ9UBD6 479 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 PADI1Q9ULC6 663 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 MGAT4BQ9UQ53 548 aa18.92■□□□□ 0.62
SMCO4-203ENST00000526869 A0A1W2PQ72 361 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 SH3PXD2BA1X283 911 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 CLDN24A6NM45 220 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 FRS3O43559 492 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 TPST2O60704 377 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 UGT2B11O75310 529 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 KLF7O75840 302 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 ADAP00813 363 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 NGFRP08138 427 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 RAB40ALP0C0E4 278 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 SLC26A5P58743 744 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 RNF4P78317 190 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 TRAM2Q15035 370 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 ENTPD8Q5MY95 495 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 TMEM164Q5U3C3 297 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 KRT80Q6KB66 452 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 FAM199XQ6PEV8 388 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 PLEKHM3Q6ZWE6 761 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 TSPYL5Q86VY4 417 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 PARP8Q8N3A8 854 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF559Q9BR84 538 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF556Q9HAH1 456 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 PAPOLBQ9NRJ5 636 aaKnown RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 PNPLA3Q9NST1 481 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF223Q9UK11 482 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 SLC35A3Q9Y2D2 325 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 PTRH2Q9Y3E5 179 aaKnown RBP18.91■□□□□ 0.62
SMCO4-203ENST00000526869 NINQ8N4C6 2090 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 KIF26BQ2KJY2 2108 aa18.91■□□□□ 0.62
SMCO4-203ENST00000526869 IGHV3-20A0A0C4DH32 117 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 SERINC4A6NH21 518 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 PROB1E7EW31 1015 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 E9PQ18 207 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 TSPAN2O60636 221 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 CYP7B1O75881 506 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 UMODP07911 640 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 LYNP07948 512 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 GNAO1P09471 354 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 KRT20P35900 424 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 PLAURQ03405 335 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 KLHL26Q53HC5 615 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF550Q7Z398 422 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF440Q8IYI8 595 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 DEFB124Q8NES8 71 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 SLC7A13Q8TCU3 470 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 SLC38A4Q969I6 547 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 ZNF700Q9H0M5 742 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 DNAJB12Q9NXW2 375 aaKnown RBP18.9■□□□□ 0.62
SMCO4-203ENST00000526869 MYO15AQ9UKN7 3530 aa18.9■□□□□ 0.62
SMCO4-203ENST00000526869 C9orf172C9J069 976 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 MITFO75030 526 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-203ENST00000526869 TBXA2RP21731 343 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 FOLR3P41439 243 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 NR0B1P51843 470 aaKnown RBP18.89■□□□□ 0.61
SMCO4-203ENST00000526869 PNLIPRP2P54317 469 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 CLDN6P56747 220 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 KEAP1Q14145 624 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 SEC23BQ15437 767 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 PODNL1Q6PEZ8 512 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 AQP11Q8NBQ7 271 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 FAM71CQ8NEG0 241 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 OR9Q2Q8NGE9 314 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 OR5L2Q8NGL0 311 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 CNOT9Q92600 299 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms