RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DUXAA6NLW8 204 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 B4DXG7 233 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 HDAC3O15379 428 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 HCRTR2O43614 444 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 AK1P00568 194 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 FREM3P0C091 2139 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 ZNF17P17021 662 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 BMP5P22003 454 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 SOAT1P35610 550 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 ZNF136P52737 540 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 DGKQP52824 942 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 HBA1P69905 142 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 OCRLQ01968 901 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 SRYQ05066 204 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 CASP8Q14790 479 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 SPATA19Q7Z5L4 167 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 MTERF4Q7Z6M4 381 aaKnown RBP18.66■□□□□ 0.58
VPS28-206ENST00000526734 RELL2Q8NC24 303 aaPredicted RBP18.66■□□□□ 0.58
VPS28-206ENST00000526734 ACTRT2Q8TDY3 377 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 CDS1Q92903 461 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 YIPF4Q9BSR8 244 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 SFXN3Q9BWM7 321 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 MCCC2Q9HCC0 563 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 PNPOQ9NVS9 261 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 CLCF1Q9UBD9 225 aa18.66■□□□□ 0.58
VPS28-206ENST00000526734 ARHGAP21Q5T5U3 1957 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 CLCA1A8K7I4 914 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 SYT5O00445 386 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 RCBTB2O95199 551 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 TMIGD3P0DMS9 266 aaPredicted RBP18.65■□□□□ 0.58
VPS28-206ENST00000526734 STARP49675 285 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 TLE4Q04727 773 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 AGBL2Q5U5Z8 902 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 OR4F3Q6IEY1 312 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 APOOLQ6UXV4 268 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 C9orf106Q8NAJ2 232 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 MGARPQ8TDB4 240 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 RNASE6Q93091 150 aaKnown RBP18.65■□□□□ 0.58
VPS28-206ENST00000526734 LURAP1Q96LR2 239 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 AP4B1Q9Y6B7 739 aa18.65■□□□□ 0.58
VPS28-206ENST00000526734 PRSS51A0A1B0GVH4 220 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 OR2M5A3KFT3 312 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 C7orf72A4D263 438 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 ENO4A6NNW6 628 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 C17orf51A8MQB3 221 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 KDM4EB2RXH2 506 aaPredicted RBP18.64■□□□□ 0.57
VPS28-206ENST00000526734 H3BNH8 94 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 KLF11O14901 512 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 ANKRD28O15084 1053 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 AGR2O95994 175 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 CRHP06850 196 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 WNT3P56703 355 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 LRRC74AQ0VAA2 488 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 DCST2Q5T1A1 773 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 OR2A2Q6IF42 318 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 POMZP3Q6PJE2 187 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 GRAMD2AQ8IUY3 354 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 ZBTB8AQ96BR9 441 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 SH3GL2Q99962 352 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 ZNF559Q9BR84 538 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 MANSC1Q9H8J5 431 aa18.64■□□□□ 0.57
VPS28-206ENST00000526734 ABCA12Q86UK0 2595 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 RNF103-CHMP3A0A140T963 221 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 E9PBE3 544 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 SDHDO14521 159 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 TNFRSF21O75509 655 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 ZNF41P51814 821 aaPredicted RBP18.63■□□□□ 0.57
VPS28-206ENST00000526734 RPS3AP61247 264 aaKnown RBP18.63■□□□□ 0.57
VPS28-206ENST00000526734 TMEM44Q2T9K0 475 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 CCNJQ5T5M9 372 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 ARSKQ6UWY0 536 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 ZAR1Q86SH2 424 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 GALNT10Q86SR1 603 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 KIF18BQ86Y91 864 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 OR4A15Q8NGL6 344 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 MIPOL1Q8TD10 442 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 OIT3Q8WWZ8 545 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 ZBTB9Q96C00 473 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 OTUB1Q96FW1 271 aaPredicted RBP18.63■□□□□ 0.57
VPS28-206ENST00000526734 OR7D2Q96RA2 312 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 PIGMQ9H3S5 423 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 AIG1Q9NVV5 245 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 L3MBTL1Q9Y468 752 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 ZNF175Q9Y473 711 aa18.63■□□□□ 0.57
VPS28-206ENST00000526734 HCFC1P51610 2035 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 TCEA1P23193 301 aaKnown RBP18.62■□□□□ 0.57
VPS28-206ENST00000526734 S100A3P33764 101 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 SUMO3P55854 103 aaPredicted RBP18.62■□□□□ 0.57
VPS28-206ENST00000526734 MYBPHQ13203 477 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 P4HA3Q7Z4N8 544 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 C6orf120Q7Z4R8 191 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 CLECL1Q8IZS7 167 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 GTPBP8Q8N3Z3 284 aaPredicted RBP18.62■□□□□ 0.57
VPS28-206ENST00000526734 CHDHQ8NE62 594 aaPredicted RBP18.62■□□□□ 0.57
VPS28-206ENST00000526734 OR5AK3PQ8NH89 298 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 NUDT8Q8WV74 236 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 SLC35G5Q96KT7 338 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 EXD2Q9NVH0 621 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 FBXO34Q9NWN3 711 aa18.62■□□□□ 0.57
VPS28-206ENST00000526734 PAQR5Q9NXK6 330 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms