RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PGRP06401 933 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 ME2P23368 584 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 SHC1P29353 583 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CRABP2P29373 138 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CDC25BP30305 580 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 SRP14P37108 136 aaKnown RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GZMKP49863 264 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF83P51522 516 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CARD18P57730 90 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 DSCR9P59020 149 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 PSG6Q00889 435 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CSTF3Q12996 717 aaKnown RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 UAP1Q16222 522 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GRAMD1BQ3KR37 738 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 TCHHL1Q5QJ38 904 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GRTP1Q5TC63 336 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GTF2IRD2BQ6EKJ0 949 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 BHLHB9Q6PI77 547 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 TMEM107Q6UX40 140 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 APOOLQ6UXV4 268 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 C3orf62Q6ZUJ4 267 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GTF2IRD2Q86UP8 949 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 EXOC3L1Q86VI1 746 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 FAM9CQ8IZT9 166 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CENPLQ8N0S6 344 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 OR4F6Q8NGB9 312 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF675Q8TD23 568 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 RNF138Q8WVD3 245 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 MSI2Q96DH6 328 aaKnown RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 ADGRG7Q96K78 797 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 C1QTNF6Q9BXI9 259 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 EBPLQ9BY08 206 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 POTEKPQ9BYX7 375 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 DPH5Q9H2P9 285 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 EQTNQ9NQ60 294 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 GLRX2Q9NS18 164 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 CBLN4Q9NTU7 201 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 FAM120CQ9NX05 1096 aaKnown RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 NPAP1Q9NZP6 1156 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 DMGDHQ9UI17 866 aaKnown RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 ABCG2Q9UNQ0 655 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
SDCBP-211ENST00000523441 GXYLT2A0PJZ3 443 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 FAM159BA6NKW6 160 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ELOA3DA6NLF2 546 aaPredicted RBP10.3□□□□□ -0.76
SDCBP-211ENST00000523441 PPP6CO00743 305 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 TCF21O43680 179 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 APEHP13798 732 aaKnown RBP10.3□□□□□ -0.76
SDCBP-211ENST00000523441 TTKP33981 857 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF41P51814 821 aaPredicted RBP10.3□□□□□ -0.76
SDCBP-211ENST00000523441 BTKQ06187 659 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 C17orf67Q0P5P2 114 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ITGADQ13349 1161 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 SQLEQ14534 574 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 P2RY6Q15077 328 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 FAM83EQ2M2I3 478 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ELOA3BQ3SY89 546 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 IQCCQ4KMZ1 466 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 PDSS1Q5T2R2 415 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 MROH9Q5TGP6 573 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 SEZ6L2Q6UXD5 910 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF662Q6ZS27 426 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 GAS2L3Q86XJ1 694 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 MUC15Q8N387 334 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ELOA3Q8NG57 546 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 OR52N5Q8NH56 324 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 FBXO30Q8TB52 745 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 TRPC4APQ8TEL6 797 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 PIK3R3Q92569 461 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 MUCL1Q96DR8 90 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 KLHDC3Q9BQ90 382 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 SRXN1Q9BYN0 137 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 ADAM19Q9H013 955 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 VPS11Q9H270 941 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 Q9N2J8 555 aa10.3□□□□□ -0.76
SDCBP-211ENST00000523441 TNPO3Q9Y5L0 923 aaKnown RBP10.3□□□□□ -0.76
SDCBP-211ENST00000523441 E7ESA3 106 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 M0R1B8 84 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 PCDH7O60245 1069 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 COQ9O75208 318 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 IGHV3-9P01782 118 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 C2P06681 752 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 CHN1P15882 459 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 GABRA3P34903 492 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 NCBP2P52298 156 aaKnown RBP eCLIP10.29□□□□□ -0.76
SDCBP-211ENST00000523441 CDH13P55290 713 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 TRAF3Q13114 568 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF239Q16600 458 aaKnown RBP10.29□□□□□ -0.76
SDCBP-211ENST00000523441 TMEM44Q2T9K0 475 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 CR1LQ2VPA4 569 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 GLYR1Q49A26 553 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-211ENST00000523441 C11orf71Q6IPW1 123 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 KLC3Q6P597 504 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 B3GLCTQ6Y288 498 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 ESPNLQ6ZVH7 1005 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 SZRD1Q7Z422 152 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 LILRA2Q8N149 483 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms