RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TNFRSF21O75509 655 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 ALOX5P09917 674 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 G6PDP11413 515 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 EPXP11678 715 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 PRPS1L1P21108 318 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 RPL3P39023 403 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 CCT3P49368 545 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 C21orf58P58505 322 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 CPTPQ5TA50 214 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 LUZP2Q86TE4 346 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 GGNQ86UU5 652 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 ZNF781Q8N8C0 355 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 FIG4Q92562 907 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 CDS1Q92903 461 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 TUBGCP3Q96CW5 907 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 STACQ99469 402 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 SORT1Q99523 831 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 PIGQQ9BRB3 760 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 BTBD2Q9BX70 525 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 ACBD3Q9H3P7 528 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 PIGMQ9H3S5 423 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 SSU72Q9NP77 194 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 UBQLN4Q9NRR5 601 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 DUSP22Q9NRW4 184 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 GPATCH2Q9NW75 528 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 GIN1Q9NXP7 522 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 GALNT8Q9NY28 637 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 KCNE3Q9Y6H6 103 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 PRRC2AP48634 2157 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 SLC22A20A6NK97 555 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 SEC14L5O43304 696 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 NDUFB5O43674 189 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 HSPA4LO95757 839 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 C6orf47O95873 294 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 SERPINE1P05121 402 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CRHP06850 196 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 DDX5P17844 614 aaKnown RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 PSMA4P25789 261 aaKnown RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 LCN1P31025 176 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 PRIM2P49643 509 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 IST1P53990 364 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CLDN8P56748 225 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ABCE1P61221 599 aaKnown RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 EEF1A1P68104 462 aaKnown RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 POU6F2P78424 691 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 EMX2Q04743 252 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 LASP1Q14847 261 aaKnown RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CD226Q15762 336 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CHI3L2Q15782 390 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 EEF1A1P5Q5VTE0 462 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CDC73Q6P1J9 531 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CAMKMTQ7Z624 323 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 BTLAQ7Z6A9 289 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 CDC20BQ86Y33 519 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 MEIOBQ8N635 442 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 COX18Q8N8Q8 333 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 GATSQ8NAP1 163 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ZBTB9Q96C00 473 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ZIM3Q96PE6 472 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 PINK1Q9BXM7 581 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ACTRT3Q9BYD9 372 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 PIGUQ9H490 435 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 RNF122Q9H9V4 155 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ATAD3AQ9NVI7 634 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 PACSIN3Q9UKS6 424 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 VDAC3Q9Y277 283 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 SNX8Q9Y5X2 465 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 AP4B1Q9Y6B7 739 aa11.14□□□□□ -0.63
VEGFA-223ENST00000523125 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 C7orf72A4D263 438 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 MSTNO14793 375 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 TM9SF1O15321 606 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 CGAP01215 116 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF17P17021 662 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 EEFSECP57772 596 aaKnown RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 HBA1P69905 142 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 OCRLQ01968 901 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PON3Q15166 354 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 SMU1Q2TAY7 513 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PLPPR5Q32ZL2 321 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 OR2A2Q6IF42 318 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 CHMP1BQ7LBR1 199 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 P4HA3Q7Z4N8 544 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 GTPBP8Q8N3Z3 284 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 METTL25Q8N6Q8 603 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PPP1R14CQ8TAE6 165 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 FNDC9Q8TBE3 224 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 SFXN5Q8TD22 340 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms