RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 OR51D1Q8NGF3 324 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 OR52E1Q8NGJ3 308 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SH3RF2Q8TEC5 729 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ATG4AQ8WYN0 398 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 KAT2AQ92830 837 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CDS1Q92903 461 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 NKD1Q969G9 470 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SLC41A3Q96GZ6 507 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 C4orf36Q96KX1 117 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 LRRC3BQ96PB8 259 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 OR5B2Q96R09 309 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 NODALQ96S42 347 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 OMDQ99983 421 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 MRPL45Q9BRJ2 306 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 UTP23Q9BRU9 249 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SGPP1Q9BX95 441 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CACNG6Q9BXT2 260 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SLC38A1Q9H2H9 487 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CXorf21Q9HAI6 301 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 POPDC2Q9HBU9 364 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SMURF1Q9HCE7 757 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 POLE4Q9NR33 117 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SLC25A13Q9UJS0 675 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ICKQ9UPZ9 632 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PPP1R3CQ9UQK1 317 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CCL26Q9Y258 94 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 TBL2Q9Y4P3 447 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 GPR179Q6PRD1 2367 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 NUP205Q92621 2012 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 EML5Q05BV3 1969 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 DCHS1Q96JQ0 3298 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 MYOFQ9NZM1 2061 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 A0A1W2PQL4 384 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SMIM30A4D0T7 59 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 C4orf47A7E2U8 309 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 A8MXK9 166 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 LEFTY2O00292 366 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SLC28A1O00337 649 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 BCAT2O15382 392 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 GYG2O15488 501 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF264O43296 627 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 OIP5O43482 229 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 KDELR3O43731 214 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SUSD5O60279 629 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SRPX2O60687 465 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 RAMP3O60896 148 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 VPS26AO75436 327 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 UPK1BO75841 260 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 FAM155BO75949 473 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SEC14L2O76054 403 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SIX3O95343 332 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 IFNA21P01568 189 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ABHD2P08910 425 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ACO1P21399 889 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DPP4P27487 766 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SSTR2P30874 369 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SDC4P31431 198 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ETV6P41212 452 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 HTR5AP47898 357 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CCR8P51685 355 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SNU13P55769 128 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 NME5P56597 212 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 TAS2R39P59534 338 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 RAB5BP61020 215 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ABCE1P61221 599 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CCL7P80098 99 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 MRPS21P82921 87 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 TAF10Q12962 218 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 BNIP3Q12983 259 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 OLIG2Q13516 323 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DPYSL3Q14195 570 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 PTCHD3Q3KNS1 767 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 RNFT1Q5M7Z0 435 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 Q5PR19 223 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SDHAF4Q5VUM1 108 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 LEMD1Q68G75 181 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 NADSYN1Q6IA69 706 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 FSTL4Q6MZW2 842 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 VHLLQ6RSH7 139 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM108Q6UXF1 575 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 C3P1Q6ZMU1 363 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 UBE2R2Q712K3 238 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DPPA4Q7L190 304 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM135Q86UB9 458 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CUZD1Q86UP6 607 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 THOC6Q86W42 341 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CFAP206Q8IYR0 622 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CDYL2Q8N8U2 506 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 AQP11Q8NBQ7 271 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 OR8J3Q8NGG0 315 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 STT3BQ8TCJ2 826 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 NETO1Q8TDF5 533 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 RIT1Q92963 219 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ADIPOR1Q96A54 375 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 BTN2A3PQ96KV6 586 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 GPR137Q96N19 417 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms