RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PSMA4P25789 261 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 SRSF4Q08170 494 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CHIT1Q13231 466 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 GANABQ14697 944 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 SLMAPQ14BN4 828 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 MORF4L2Q15014 288 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 TSNQ15631 228 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 TBCCQ15814 346 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 TIMM23BQ5SRD1 257 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 Q6ZT83 130 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 TDRPQ86YL5 185 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 C1QL4Q86Z23 238 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 RNF10Q8N5U6 811 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 ADCY4Q8NFM4 1077 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR4N2Q8NGD1 307 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR52R1Q8NGF1 315 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CALML6Q8TD86 181 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 RNF128Q8TEB7 428 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 ANKRD49Q8WVL7 239 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 RGMAQ96B86 450 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CMTM7Q96FZ5 175 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 SIGLEC10Q96LC7 697 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 EGFL8Q99944 293 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 KLHDC3Q9BQ90 382 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 LRRC1Q9BTT6 524 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 EFCAB11Q9BUY7 163 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CAPS2Q9BXY5 557 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CDC42EP4Q9H3Q1 356 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 DDX31Q9H8H2 851 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 PPP4R1LQ9P1A2 415 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 BCAP29Q9UHQ4 241 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 PRSS50Q9UI38 385 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 POU2F3Q9UKI9 436 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 CES1P1Q9UKY3 287 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 MCTS1Q9ULC4 181 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 USP22Q9UPT9 525 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 VWA7Q9Y334 891 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 REXO2Q9Y3B8 237 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 PMF1-BGLAPU3KQ54 211 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 A0A1W2PR80 420 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 NCF1BA6NI72 391 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR5H1A6NKK0 313 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 NCF1CA8MVU1 366 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SCO2O43819 266 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 DHRS4L1P0CG22 281 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PCNAP12004 261 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 NCF1P14598 390 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF17P17021 662 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF37AP17032 561 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PGCP20142 388 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PTAFRP25105 342 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PIK3R1P27986 724 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SHC1P29353 583 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 APOBEC3AP31941 199 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 EVI2BP34910 448 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 MAGEA3P43357 314 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 KCNJ1P48048 391 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 HSPA7P48741 367 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF83P51522 516 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 CHN2P52757 468 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 CHRNB3Q05901 458 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 RIN1Q13671 783 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 CCNIQ14094 377 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF460Q14592 562 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 GLYR1Q49A26 553 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 LGSNQ5TDP6 509 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 TMEM108Q6UXF1 575 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 LARP4Q71RC2 724 aaKnown RBP eCLIP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 CNTN4Q8IWV2 1026 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF540Q8NDQ6 660 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR2W6PQ8NHA6 318 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 HUS1BQ8NHY5 278 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 DUSP19Q8WTR2 217 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 OSTF1Q92882 214 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 EFHD2Q96C19 240 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 DTNBP1Q96EV8 351 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SLC6A7Q99884 636 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 FAM167BQ9BTA0 163 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SRXN1Q9BYN0 137 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 FRMD8P1Q9BZ68 369 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PLAC1Q9HBJ0 212 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SAYSD1Q9NPB0 183 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 ACSS1Q9NUB1 689 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 HIF1ANQ9NWT6 349 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 PDP1Q9P0J1 537 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 KLHL13Q9P2N7 655 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 CORO1CQ9ULV4 474 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 MGAT4BQ9UQ53 548 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 SLC25A15Q9Y619 301 aa7.74□□□□□ -1.17
TRAPPC9-212ENST00000521944 LOC105371242A0A075B767 164 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 GOLGA6L10A0A0M3HER8 536 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 B4DSR2 109 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 CLGNO14967 610 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 PORP16435 677 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 COX5AP20674 150 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 PNLIPRP2P54317 469 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 MRPS35P82673 323 aaKnown RBP7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 IRF8Q02556 426 aa7.73□□□□□ -1.17
TRAPPC9-212ENST00000521944 STX5Q13190 355 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms