RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HTR2AP28223 471 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 RNF144AP50876 292 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 ST3GAL4Q11206 333 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 RASSF6Q6ZTQ3 369 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 C16orf52Q8NHV5 167 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TMEM255BQ8WV15 326 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 YIPF6Q96EC8 236 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TVP23BQ9NYZ1 205 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 FPR3P25089 353 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 SMSP52788 366 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 NFATC3Q12968 1075 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 OR1Q1Q15612 314 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 PDZK1Q5T2W1 519 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 PRAMEF17Q5VTA0 474 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 NRMQ8IXM6 262 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TCEANCQ8N8B7 351 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF615Q8N8J6 731 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 RCBTB1Q8NDN9 531 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TEX47Q8TBZ9 253 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 POLDIP3Q9BY77 421 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 PLA2G12AQ9BZM1 189 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF768Q9H5H4 540 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 SLC25A19Q9HC21 320 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TIMMDC1Q9NPL8 285 aa17.11■□□□□ 0.33
TRAPPC9-210ENST00000521667 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 BCAS1O75363 584 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 CT45A8P0DMV1 189 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 CT45A9P0DMV2 189 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PNLIPP16233 465 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 DRD5P21918 477 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PCYT1AP49585 367 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PLAURQ03405 335 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 DSG2Q14126 1118 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PLK5Q496M5 336 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 CT45A2Q5DJT8 189 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 SAP25Q8TEE9 199 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 G6PC3Q9BUM1 346 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 DSN1Q9H410 356 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 KRCC1Q9NPI7 259 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PRODH2Q9UF12 536 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 PCDH15Q96QU1 1955 aa17.1■□□□□ 0.33
TRAPPC9-210ENST00000521667 TMEM221A6NGB7 291 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 C17orf105B2RV13 164 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 M0R296 226 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 KLF4O43474 513 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 GABARAPO95166 117 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 CLPSP04118 112 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 PIPP12273 146 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 STAT5AP42229 794 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 SLC15A1P46059 708 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 NR0B2Q15466 257 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 OCLNQ16625 522 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ACSM5Q6NUN0 579 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 C1orf210Q8IVY1 113 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF614Q8N883 585 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 OR7G1Q8NGA0 311 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 OR4C6Q8NH72 309 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 PIGKQ92643 395 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF501Q96CX3 271 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 BCL7BQ9BQE9 202 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 PRSS27Q9BQR3 290 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ITPAQ9BY32 194 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 FGF21Q9NSA1 209 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 C14orf105Q9NVL8 296 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 DNAJC27Q9NZQ0 273 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 DSCR3O14972 297 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 TOX3O15405 576 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 PIP5K1CO60331 668 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 IRF3Q14653 427 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 CTF1Q16619 201 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 HLA-BQ31612 363 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 MFSD4BQ5TF39 518 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 SLC27A4Q6P1M0 643 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 TMEM71Q6P5X7 295 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 QSOX2Q6ZRP7 698 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 GRAMD2AQ8IUY3 354 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 FAM26EQ8N5C1 309 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 PTPMT1Q8WUK0 201 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 CNOT9Q92600 299 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF304Q9HCX3 659 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 FSCN3Q9NQT6 498 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 CBLCQ9ULV8 474 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZDBF2Q9HCK1 2354 aa17.09■□□□□ 0.33
TRAPPC9-210ENST00000521667 TLX2O43763 284 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 PRKYO43930 277 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 FBLP22087 321 aaKnown RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 NR4A1P22736 598 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 GPR4P46093 362 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF141Q15928 474 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 NNATQ16517 81 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 MINDY4Q4G0A6 757 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 SLC25A30Q5SVS4 291 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 YOD1Q5VVQ6 348 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 GUSBP11Q6P575 273 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms