RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF696Q9H7X3 374 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 UCK1Q9HA47 277 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 POPDC3Q9HBV1 291 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SYTL2Q9HCH5 934 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TAS2R13Q9NYV9 303 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ABI3Q9P2A4 366 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF624Q9P2J8 865 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OR14J1Q9UGF5 321 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SLC24A2Q9UI40 661 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TRMT6Q9UJA5 497 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PSMD13Q9UNM6 376 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 KLHL20Q9Y2M5 609 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HEBP2Q9Y5Z4 205 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 IKBKGQ9Y6K9 419 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 COLEC10Q9Y6Z7 277 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 U3KQA8 63 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 NUP205Q92621 2012 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 KMT2EQ8IZD2 1858 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 COL6A3P12111 3177 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 XIRP2A4UGR9 3374 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 REV3LO60673 3130 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 IQANK1A0A1B0GTG1 560 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 OR52A4PA6NMU1 304 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TRIM49D1C9J1S8 452 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GFYI3L273 518 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RASGRF2O14827 1237 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ZW10O43264 779 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 NUDT21O43809 227 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ZBTB14O43829 449 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 AHCYL1O43865 530 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 HS6ST1O60243 411 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TMCC2O75069 709 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PSIP1O75475 530 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 KCNK5O95279 499 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 OR2C1O95371 312 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 C1orf105O95561 183 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TSPAN12O95859 305 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LDLRP01130 860 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 MT-ND3P03897 115 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CATP04040 527 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RPN2P04844 631 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 C2P06681 752 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GP1BAP07359 652 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 C8GP07360 202 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SLC35E2BP0CK96 405 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CCDC166P0CW27 439 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CEACAM1P13688 526 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 H2AFXP16104 143 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 STMN1P16949 149 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SAT1P21673 171 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ACP1P24666 158 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GCAP28676 217 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CD1CP29017 333 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 AHRP35869 848 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 HSD17B2P37059 387 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SLC26A3P40879 764 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RAD52P43351 418 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 MAGEA12P43365 314 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ACADVLP49748 655 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SERPINB8P50452 374 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CSRP3P50461 194 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LINC01547P58512 204 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RAB10P61026 200 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 IFFO1Q0D2I5 559 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ILKQ13418 452 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 NR1D2Q14995 579 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CLPPQ16740 277 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 BEND6Q5SZJ8 279 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 MFSD4BQ5TF39 518 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GKAP1Q5VSY0 366 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 C18orf63Q68DL7 685 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GUSBP11Q6P575 273 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TTC23LQ6PF05 361 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM207Q6UWW9 146 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 UNC5DQ6UXZ4 953 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM26Q6ZUK4 368 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RAPH1Q70E73 1250 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PIWIL4Q7Z3Z4 852 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SZRD1Q7Z422 152 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CROCCP2Q86T23 111 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CEP97Q8IW35 865 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CPNE9Q8IYJ1 553 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TBC1D21Q8IYX1 336 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RIBC1Q8N443 379 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 Q8N9G6 341 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 DEFB124Q8NES8 71 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 OR14L1PQ8NHC6 308 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CFAP61Q8NHU2 1237 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 MCOLN3Q8TDD5 553 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 EEF1AKMT1Q8WVE0 214 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SNRNP27Q8WVK2 155 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SKA2Q8WVK7 121 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RAD51AP1Q96B01 352 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF501Q96CX3 271 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CXorf40BQ96DE9 158 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LGALS12Q96DT0 336 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LINGO1Q96FE5 620 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ATXN7L3BQ96GX2 97 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 GRAMD2BQ96HH9 432 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF354BQ96LW1 612 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms