RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 GUCA1CO95843 209 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TBX6O95947 436 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TGFAP01135 160 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CLPSP04118 112 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 VIMP08670 466 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SLC35E2BP0CK96 405 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SLC35E2P0CK97 266 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CCDC166P0CW27 439 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 IL32P24001 234 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TTKP33981 857 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SSR2P43308 183 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 STARP49675 285 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PDLIM4P50479 330 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 EFNA4P52798 201 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 BLVRAP53004 296 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CDH11P55287 796 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MRPS25P82663 173 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ID2Q02363 134 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 BSPH1Q075Z2 132 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PLCXD2Q0VAA5 305 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MLC1Q15049 377 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HIST2H2ACQ16777 129 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MIDNQ504T8 468 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GTF2IRD2BQ6EKJ0 949 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HIST2H2AA3Q6FI13 130 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 C11orf71Q6IPW1 123 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 DRICH1Q6PGQ1 229 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CCDC137Q6PK04 289 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PAQR3Q6TCH7 311 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FIP1L1Q6UN15 594 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF793Q6ZN11 406 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 USP43Q70EL4 1123 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF771Q7L3S4 317 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GALNT7Q86SF2 657 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GTF2IRD2Q86UP8 949 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GPR180Q86V85 440 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 DENND6AQ8IWF6 608 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FBXL14Q8N1E6 418 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MUC15Q8N387 334 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TCAIMQ8N3R3 496 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZCCHC7Q8N3Z6 543 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 LILRB2Q8N423 598 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ARFGAP2Q8N6H7 521 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TEX29Q8N6K0 151 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF525Q8N782 197 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 BHLHE22Q8NFJ8 381 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 KBTBD8Q8NFY9 601 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FNDC9Q8TBE3 224 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF418Q8TF45 676 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 IPCEF1Q8WWN9 437 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FIG4Q92562 907 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HGDQ93099 445 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 UBE2E3Q969T4 207 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PPWD1Q96BP3 646 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF669Q96BR6 464 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 S100PBPQ96BU1 408 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PTCD3Q96EY7 689 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 C1orf159Q96HA4 380 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PDLIM5Q96HC4 596 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SERPINB12Q96P63 405 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FMO2Q99518 471 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TMEM109Q9BVC6 243 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 POTEKPQ9BYX7 375 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 DDX47Q9H0S4 455 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 OR10A5Q9H207 317 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MANSC1Q9H8J5 431 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CNOT10Q9H9A5 744 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 WDR41Q9HAD4 459 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CXorf21Q9HAI6 301 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GALNT9Q9HCQ5 603 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MRGBPQ9NV56 204 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TMEFF2Q9UIK5 374 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FBXO5Q9UKT4 447 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MCTS1Q9ULC4 181 aaKnown RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 CORO1CQ9ULV4 474 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MGAT4BQ9UQ53 548 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 DTX4Q9Y2E6 619 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 FKBP7Q9Y680 259 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 AP4B1Q9Y6B7 739 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PMF1-BGLAPU3KQ54 211 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PRR14LQ5THK1 2151 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HEATR1Q9H583 2144 aaKnown RBP4.34□□□□□ -1.71
SDCBP-207ENST00000520168 LOC390937A0A1W2PQ73 354 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 ESYT3A0FGR9 886 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 VWC2LB2RUY7 222 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 J3KRW8 73 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 TMPRSS2O15393 492 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 HAUS5O94927 633 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 AIFM1O95831 613 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 RNASE1P07998 156 aaKnown RBP4.34□□□□□ -1.71
SDCBP-207ENST00000520168 NUDT17P0C025 328 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 MYZAPP0CAP1 466 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 PABPC4LP0CB38 370 aaKnown RBP4.34□□□□□ -1.71
SDCBP-207ENST00000520168 MLNP12872 115 aa4.34□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF23P17027 643 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms