RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SSTR4P31391 388 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 SLC5A2P31639 672 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF155Q12901 538 aaPredicted RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 GPR68Q15743 365 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 MAPK14Q16539 360 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 MRPL14Q6P1L8 145 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 KLHL17Q6TDP4 642 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 TIPARPQ7Z3E1 657 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 PEX5LQ8IYB4 626 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 PARP8Q8N3A8 854 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 GALNT15Q8N3T1 639 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 UBE2FQ969M7 185 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 SPSB2Q99619 263 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 LMF2Q9BU23 707 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 FNDC11Q9BVV2 318 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 SLC26A1Q9H2B4 701 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 CXorf56Q9H5V9 222 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF556Q9HAH1 456 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 FOLH1BQ9HBA9 442 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 KCNE5Q9UJ90 142 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 PADI1Q9ULC6 663 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ERVK-19Q9WJR5 959 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 IFT52Q9Y366 437 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 IGHV3-20A0A0C4DH32 117 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 SLC1A7O00341 560 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 DLGAP3O95886 979 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 EMP2P54851 167 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 EEF1A1P68104 462 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 POU6F2P78424 691 aaPredicted RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 PSG6Q00889 435 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 MAD2L1BPQ15013 274 aaPredicted RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 NCF4Q15080 339 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 PODNL1Q6PEZ8 512 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 FIGNL1Q6PIW4 674 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF773Q6PK81 442 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF836Q6ZNA1 936 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF619Q8N2I2 560 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 METTL21AQ8WXB1 218 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 POLR1BQ9H9Y6 1135 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 ZNF232Q9UNY5 417 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 PTRH2Q9Y3E5 179 aaKnown RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 HEMK1Q9Y5R4 338 aaPredicted RBP13.4□□□□□ -0.26
CLN8-204ENST00000519254 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
CLN8-204ENST00000519254 KIAA0513O60268 411 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 ALOX12BO75342 701 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 KCNK2O95069 426 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 AK1P00568 194 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 ADAP00813 363 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 THBS1P07996 1170 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 HTR1AP08908 422 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 EEF1B2P24534 225 aaKnown RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 GGT2P36268 569 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 FUT7Q11130 342 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 BIKQ13323 160 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 LARS2Q15031 903 aaKnown RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 PGBD2Q6P3X8 592 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 ZNF517Q6ZMY9 492 aaPredicted RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 PTPMT1Q8WUK0 201 aaPredicted RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 OR8D2Q9GZM6 311 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 TRIM45Q9H8W5 580 aaPredicted RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 WDR54Q9H977 334 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 REV1Q9UBZ9 1251 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 NXT1Q9UKK6 140 aaKnown RBP13.39□□□□□ -0.27
CLN8-204ENST00000519254 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 DTX4Q9Y2E6 619 aa13.39□□□□□ -0.27
CLN8-204ENST00000519254 NPIPA5A0A0B4J1W7 369 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 NPIPA7E9PJI5 369 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 DYRK3O43781 588 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 OR10H3O60404 316 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 BRINP1O60477 761 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 WBP4O75554 376 aaKnown RBP13.38□□□□□ -0.27
CLN8-204ENST00000519254 ANGPTL1O95841 491 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 CCDC159P0C7I6 412 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 NPIPA8P0DM63 369 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 TCN2P20062 427 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 RBMS1P29558 406 aaKnown RBP13.38□□□□□ -0.27
CLN8-204ENST00000519254 FMO3P31513 532 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 GALNSP34059 522 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
CLN8-204ENST00000519254 NUP107P57740 925 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 GABARAPL2P60520 117 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 HOXC5Q00444 222 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 CNPY1Q3B7I2 92 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 BORAQ6PGQ7 559 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 ANKRD37Q7Z713 158 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 ZAR1Q86SH2 424 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 ENTHD1Q8IYW4 607 aa13.38□□□□□ -0.27
CLN8-204ENST00000519254 CACTIN-AS1Q8N1I8 211 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms