RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PRAMEF20Q5VT98 475 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PRAMEF7Q5VXH5 474 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 C6orf89Q6UWU4 347 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ISLR2Q6UXK2 745 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF600Q6ZNG1 722 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 TRMT10CQ7L0Y3 403 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 SERINC5Q86VE9 423 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 HPS6Q86YV9 775 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 TCAIMQ8N3R3 496 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 SPEM1Q8N4L4 309 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF321PQ8N8H1 164 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 EIF1ADQ8N9N8 165 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ERMNQ8TAM6 284 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 DNAJA4Q8WW22 397 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PEX13Q92968 403 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 DTD2Q96FN9 168 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PIWIL1Q96J94 861 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CPXM1Q96SM3 734 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 TSG101Q99816 390 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 FAM192AQ9GZU8 254 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 RAB17Q9H0T7 212 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GLT8D2Q9H1C3 349 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GORASP2Q9H8Y8 452 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 IL1RL2Q9HB29 575 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 NGBQ9NPG2 151 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 FAM120CQ9NX05 1096 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GPR83Q9NYM4 423 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 EMCNQ9ULC0 261 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ENTPD4Q9Y227 616 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PRELID1Q9Y255 219 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 EVC2Q86UK5 1308 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PRG4Q92954 1404 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PTPRMP28827 1452 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CUX1P39880 1505 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ZCCHC11Q5TAX3 1644 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PREX1Q8TCU6 1659 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 LOC100506127A0A0U1RQW1 187 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 WRBO00258 174 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PRRG1O14668 218 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 NIPSNAP2O75323 286 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SCGB2A1O75556 95 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 VENTXO95231 258 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 NUDT14O95848 222 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ECDO95905 644 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 GOT2P00505 430 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 AK1P00568 194 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PCCBP05166 539 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 HPGDP15428 266 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 AHCYP23526 432 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 MARCKSP29966 332 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 MAT2AP31153 395 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 OTX2P32243 289 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 CCR1P32246 355 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 STARP49675 285 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 RPS8P62241 208 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PPIAP62937 165 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 UBE2IP63279 158 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 OVGP1Q12889 678 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PEX6Q13608 980 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 IL18Q14116 193 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 Q1RN00 199 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 Q3ZCU0 254 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 C14orf28Q4W4Y0 310 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 C1orf185Q5T7R7 199 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 RAET1GQ6H3X3 334 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 CLEC2AQ6UVW9 174 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ARSKQ6UWY0 536 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 CWC27Q6UX04 472 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 STOX1Q6ZVD7 989 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ARMCX2Q7L311 632 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 KIAA1328Q86T90 577 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 VASH2Q86V25 355 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 VPS36Q86VN1 386 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ERO1BQ86YB8 467 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 C12orf56Q8IXR9 622 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 EFCAB13Q8IY85 973 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF679Q8IYX0 411 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ELMOD2Q8IZ81 293 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SPAG16Q8N0X2 631 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 BHLHE23Q8NDY6 225 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TRPV1Q8NER1 839 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 OR6T1Q8NGN1 323 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 CLHC1Q8NHS4 586 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TBCKQ8TEA7 893 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 U2AF1L4Q8WU68 220 aaKnown RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 PIBF1Q8WXW3 757 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 FBXO32Q969P5 355 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM186Q96B77 213 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SGK3Q96BR1 496 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TCEANC2Q96MN5 208 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TTC25Q96NG3 672 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ACCSQ96QU6 501 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 OSBPL10Q9BXB5 764 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 GPR174Q9BXC1 333 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TBC1D10AQ9BXI6 508 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 AZI2Q9H6S1 392 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms