RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ZNF3P17036 446 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 CCKBRP32239 447 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 CDKN2AP42771 156 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 SLC7A2P52569 658 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 EEF1A1P68104 462 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 CDKL1Q00532 357 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ZFP36L1Q07352 338 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 COTL1Q14019 142 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 CRMP1Q14194 572 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ATXN7L3Q14CW9 347 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 EEF1A1P5Q5VTE0 462 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 SLC8B1Q6J4K2 584 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 RHBDD2Q6NTF9 364 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 PRSS57Q6UWY2 283 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ZNF730Q6ZMV8 503 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 GPR142Q7Z601 462 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 GABRG1Q8N1C3 465 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 KCNH5Q8NCM2 988 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 OR4A15Q8NGL6 344 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 CLHC1Q8NHS4 586 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 C8orf46Q8TAG6 207 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ZNF473Q8WTR7 871 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 BADQ92934 168 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ART4Q93070 314 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 NAF1Q96HR8 494 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 ARL5BQ96KC2 179 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 FAM210AQ96ND0 272 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 IL4I1Q96RQ9 567 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 FMO2Q99518 471 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 FNDC4Q9H6D8 234 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 C3orf14Q9HBI5 128 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 POLD4Q9HCU8 107 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 NRN1Q9NPD7 142 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 SIGLEC8Q9NYZ4 499 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 RNF24Q9Y225 148 aa4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 MYH14Q7Z406 1995 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-202ENST00000517533 BRD4O60885 1362 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SNED1Q8TER0 1413 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 A0A1B0GUH1 482 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 MYMKA6NI61 221 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 IQCF5A8MTL0 148 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SIGLEC5O15389 551 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CABYRO75952 493 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 F10P00742 488 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 GSTA1P08263 222 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PGCP20142 388 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 OTX1P32242 354 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CDH5P33151 784 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CD80P33681 288 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 FEN1P39748 380 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SLC1A4P43007 532 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PGFP49763 221 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 HLCSP50747 726 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 EFNB2P52799 333 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 MAP3K7CLP57077 242 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 DCDC1P59894 354 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 YWHAEP62258 255 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 OGDHQ02218 1023 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 ILF3Q12906 894 aaKnown RBP eCLIP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 TAF13Q15543 124 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 AANATQ16613 207 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 XKR6Q5GH73 641 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 FGD3Q5JSP0 725 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 OTUD3Q5T2D3 398 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 C6orf89Q6UWU4 347 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SSX9Q7RTT3 188 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CIARTQ8N365 385 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 Q8N9G6 341 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 OR7G2Q8NG99 324 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 NDNFQ8TB73 568 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CNIH3Q8TBE1 160 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CD300LFQ8TDQ1 290 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 ACMSDQ8TDX5 336 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PAQR8Q8TEZ7 354 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 ARNTL2Q8WYA1 636 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PNPLA2Q96AD5 504 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SCRN2Q96FV2 425 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CERS2Q96G23 380 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 TIMD4Q96H15 378 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 NSL1Q96IY1 281 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 CAPNS2Q96L46 248 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 IL12RB2Q99665 862 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 TMEM121Q9BTD3 319 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 DUSP16Q9BY84 665 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PRRG3Q9BZD7 231 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 IL22Q9GZX6 179 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 C19orf25Q9UFG5 118 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 PURGQ9UJV8 347 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 RASD1Q9Y272 281 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SH3TC1Q8TE82 1336 aa4.91□□□□□ -1.62
CTNNA1-202ENST00000517533 SAA2-SAA4A0A096LPE2 208 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 A0A0J9YVX5 310 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 A0A1W2PPI3 338 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 A0A1W2PPV9 198 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 TRAFD1O14545 582 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 LATO43561 262 aa4.9□□□□□ -1.63
CTNNA1-202ENST00000517533 N4BP1O75113 896 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms