RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SPINK9Q5DT21 86 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 FAM78AQ5JUQ0 283 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 IL23RQ5VWK5 629 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 AP1ARQ63HQ0 302 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF730Q6ZMV8 503 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 TRIM69Q86WT6 500 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CEP57Q86XR8 500 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 ARMC8Q8IUR7 673 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 APCDD1Q8J025 514 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 RNF10Q8N5U6 811 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 ACOT11Q8WXI4 607 aaPredicted RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 RAD54LQ92698 747 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 MCHR2Q969V1 340 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 PNPLA2Q96AD5 504 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 ELP4Q96EB1 424 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 WDR34Q96EX3 536 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 DACH2Q96NX9 599 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 SDCBP2Q9H190 292 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 TAOK3Q9H2K8 898 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 RANBP17Q9H2T7 1088 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 C12orf10Q9HB07 376 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CHMP1AQ9HD42 196 aaPredicted RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 HMG20AQ9NP66 347 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 OBP2BQ9NPH6 170 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CNOT2Q9NZN8 540 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 GPATCH8Q9UKJ3 1502 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 NCKAP5O14513 1909 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 PIEZO2Q9H5I5 2752 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 GOLGA6L10A0A0M3HER8 536 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 SMIM28A0A1B0GU29 152 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF716A6NP11 495 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 NPIPA2E9PIF3 369 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 INS-IGF2F8WCM5 200 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 NPIPA3F8WFD2 350 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 B4GAT1O43505 415 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF780AO75290 641 aaPredicted RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 GRAP2O75791 330 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 SNAPINO95295 136 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGLV2-23P01705 113 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC4A1P02730 911 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 CD3DP04234 171 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 HEXBP07686 556 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 LYNP07948 512 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGLL1P15814 213 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 GABRA5P31644 462 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 HNRNPH3P31942 346 aaKnown RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAP2K4P45985 399 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ASMTP46597 345 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 CXCL12P48061 93 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 IDH2P48735 452 aaKnown RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 LIM2P55344 173 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ABRQ12979 859 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 LCP2Q13094 533 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 HES1Q14469 280 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 NFE2L1Q14494 772 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 GSTA3Q16772 222 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 FAM98BQ52LJ0 330 aaKnown RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGSF11Q5DX21 431 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ANKRD45Q5TZF3 282 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 TCEAL6Q6IPX3 200 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 FIGLAQ6QHK4 219 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 CENPVQ7Z7K6 275 aaPredicted RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 BIVMQ86UB2 503 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 LCA5Q86VQ0 697 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 COA5Q86WW8 74 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 RALGPS2Q86X27 583 aaPredicted RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ICA1LQ8NDH6 482 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR6Y1Q8NGX8 325 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 C17orf50Q8WW18 174 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF606Q8WXB4 792 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ELMOD3Q96FG2 381 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 TIMD4Q96H15 378 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 VPS39Q96JC1 886 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 IP6K3Q96PC2 410 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF559Q9BR84 538 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 C1orf50Q9BV19 199 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 TM2D1Q9BX74 207 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR11A1Q9GZK7 315 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 UNC45AQ9H3U1 944 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 KIR3DX1Q9H7L2 352 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 Q9H8V8 135 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 POPDC2Q9HBU9 364 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 FANCFQ9NPI8 374 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 TREX1Q9NSU2 369 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 AIG1Q9NVV5 245 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 UBQLN1Q9UMX0 589 aaKnown RBP-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 NME7Q9Y5B8 376 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 WNK1Q9H4A3 2382 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 CLUHO75153 1309 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 SVEP1Q4LDE5 3571 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 ANKRD30BQ9BXX2 1392 aa-1.99□□□□□ -2.73
SNORA40.16-201ENST00000517238 PXDNLA1KZ92 1463 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGHV5-10-1A0A0J9YXX1 117 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 MYO1GB0I1T2 1018 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 EIF3CLB5ME19 914 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 F5H6K3 240 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 MFNGO00587 321 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SCAMP1O15126 338 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 LDLRAD4O15165 306 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SNX3O60493 162 aa-2□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms