RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 SIX6OS1Q8N1H7 587 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 LRRC52Q8N7C0 313 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 RNF139Q8WU17 664 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 CKAP2Q8WWK9 683 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 PRCCQ92733 491 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF607Q96SK3 696 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 CPXM1Q96SM3 734 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 PKMYT1Q99640 499 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 RNF126Q9BV68 326 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 CCDC106Q9BWC9 280 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 OR11A1Q9GZK7 315 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 MAGT1Q9H0U3 335 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 AIG1Q9NVV5 245 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 UVRAGQ9P2Y5 699 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SLC9A8Q9Y2E8 581 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SCN1AP35498 2009 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 PFASO15067 1338 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 DMBT1Q9UGM3 2413 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 PTPRTO14522 1441 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CR1P17927 2039 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 IGHV3OR16-8A0A075B7F1 116 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 A0A1W2PP18 115 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 SDHAF1A6NFY7 115 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 GLOD5A6NK44 160 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 PDLIM1O00151 329 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CD5LO43866 347 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 PTP4A3O75365 173 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TADA2AO75478 443 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 ANKRD34CP0C6C1 535 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CHTF8P0CG12 524 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 EZRP15311 586 aaKnown RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TCP1P17987 556 aaKnown RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CYP3A5P20815 502 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 GCKP35557 465 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 GDI2P50395 445 aaKnown RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 PLD1Q13393 1074 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 KRT32Q14532 448 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 NRF1Q16656 503 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CYP51A1Q16850 503 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TMEM183BQ1AE95 376 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 DUSP28Q4G0W2 176 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TCHHL1Q5QJ38 904 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 DDI2Q5TDH0 399 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 VRK2Q86Y07 508 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TMEM183AQ8IXX5 376 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 LINC00518Q8N0U6 118 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF444Q8N0Y2 327 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CCNYQ8ND76 341 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF680Q8NEM1 530 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 SETD6Q8TBK2 473 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 IL1F10Q8WWZ1 152 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 EXT2Q93063 718 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 ASB9Q96DX5 294 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 L3HYPDHQ96EM0 354 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 AGPAT1Q99943 283 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 SMR3AQ99954 134 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TIMM29Q9BSF4 260 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 CHIAQ9BZP6 476 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 SLC40A1Q9NP59 571 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 PPIEQ9UNP9 301 aaKnown RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 TMEM98Q9Y2Y6 226 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 UGT2A1Q9Y4X1 527 aa-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 DYNC1LI1Q9Y6G9 523 aaKnown RBP-0.72□□□□□ -2.52
SCARNA23-201ENST00000516060 DOCK8Q8NF50 2099 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 FRAS1Q86XX4 4008 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 MUC21A0A0G2JKD1 596 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 MUC21A0A140T8X8 626 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 TCRBV21S2A2A0A5A6 115 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 EI24O14681 340 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 ZNF207O43670 478 aaKnown RBP-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 IGLV2-23P01705 113 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 PGK2P07205 417 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 CD55P08174 381 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 PSMB4P28070 264 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 UBE2AP49459 152 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 GABPAQ06546 454 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 SYCNQ0VAF6 134 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 DEFB134Q4QY38 66 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 UNQ9165/PRO28630Q6UXU0 137 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 PEX5LQ8IYB4 626 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 OR52J3Q8NH60 311 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 NDRG1Q92597 394 aaKnown RBP-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 SECISBP2LQ93073 1101 aaKnown RBP-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 SCLT1Q96NL6 688 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 ABHD1Q96SE0 405 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 S1PR3Q99500 378 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 SGK2Q9HBY8 427 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 VPS54Q9P1Q0 977 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 LHX3Q9UBR4 397 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 ZNF215Q9UL58 517 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 TNS2Q63HR2 1409 aa-0.73□□□□□ -2.53
SCARNA23-201ENST00000516060 A0A0G2JN53 185 aa-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 A0A1B0GVC2 190 aa-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 MRPS12O15235 138 aaKnown RBP-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 EPB41L2O43491 1005 aaKnown RBP-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 AHCYL1O43865 530 aa-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 FCGR3BO75015 233 aa-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 PEX14O75381 377 aa-0.74□□□□□ -2.53
SCARNA23-201ENST00000516060 SUPT3HO75486 399 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms