RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 C8BP07358 591 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 PABPC4LP0CB38 370 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 NID1P14543 1247 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 PRKAR1BP31321 381 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 EVI2BP34910 448 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 TNFSF10P50591 281 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 CRYBA2P53672 197 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 GAS1P54826 345 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 FGFBP1Q14512 234 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 LINC00303Q3SY05 128 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 RNF220Q5VTB9 566 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 FNDC7Q5VTL7 733 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 GLYATQ6IB77 296 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 DHRS4L2Q6PKH6 230 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 IL20RBQ6UXL0 311 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 LINC00696Q6ZRV3 163 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 GRAMD2AQ8IUY3 354 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 POGLUT1Q8NBL1 392 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 FAM71CQ8NEG0 241 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 OR10G3Q8NGC4 313 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 UTP4Q969X6 686 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 ZG16BQ96DA0 208 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 SCMH1Q96GD3 660 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 NODALQ96S42 347 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 TIMMDC1Q9NPL8 285 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 LRFN1Q9P244 771 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 SLC7A8Q9UHI5 535 aa10.98□□□□□ -0.65
PDLIM5-220ENST00000514830 ATMQ13315 3056 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 CFAP73A6NFT4 308 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PRAMEF25A6NGN4 478 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SERINC4A6NH21 518 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 M0QX08 132 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 ERVH48-1M5A8F1 160 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SYT5O00445 386 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SCDO00767 359 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 GSTA4O15217 222 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 GMNNO75496 209 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PDE5AO76074 875 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SNX4O95219 450 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PRB1P04280 392 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 HOXB6P17509 224 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PTGDSP41222 190 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 CASP3P42574 277 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 CLK3P49761 638 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 MS4A2Q01362 244 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 KCNAB2Q13303 367 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 LARS2Q15031 903 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 OR1C1Q15619 314 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 GPR68Q15743 365 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 MAPK14Q16539 360 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 LIN52Q52LA3 116 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 RPS26P11Q5JNZ5 115 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 CBLL1Q75N03 491 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 ARMC8Q8IUR7 673 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 FAM156AQ8NDB6 213 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PSD4Q8NDX1 1056 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 FAM13CQ8NE31 585 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 OR52P1PQ8NH57 321 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 GRHL3Q8TE85 626 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 EXTL1Q92935 676 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 TAMM41Q96BW9 452 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 WBP1Q96G27 269 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SIGLEC12Q96PQ1 595 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 RAB3IPQ96QF0 476 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PINK1Q9BXM7 581 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 ARMC7Q9H6L4 198 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PROK2Q9HC23 129 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 EXOSC3Q9NQT5 275 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SDHAF3Q9NRP4 125 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SACM1LQ9NTJ5 587 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 DCAF13Q9NV06 445 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 PACSIN3Q9UKS6 424 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 ZNF232Q9UNY5 417 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 POMPQ9Y244 141 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 HEATR5AQ86XA9 2040 aa10.97□□□□□ -0.65
PDLIM5-220ENST00000514830 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CDHR4A6H8M9 788 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 AQP12BA6NM10 295 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 H3BNH8 94 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 NME2P1O60361 137 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 EIF4E2O60573 245 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SLC25A12O75746 678 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SP1P08047 785 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CCL3P10147 92 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SFTPCP11686 197 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 HPGDP15428 266 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CD46P15529 392 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 TCN1P20061 433 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CD247P20963 164 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CNR1P21554 472 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 NME2P22392 152 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms