RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 OTUB2Q96DC9 234 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 C5orf30Q96GV9 206 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 NSMCE3Q96MG7 304 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 AGAP4Q96P64 663 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 GAL3ST4Q96RP7 486 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 LGMNQ99538 433 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 DDX50Q9BQ39 737 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 NAT10Q9H0A0 1025 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 THAP9Q9H5L6 903 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 MID1IP1Q9NPA3 183 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ACP6Q9NPH0 428 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ZCCHC3Q9NUD5 404 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 MED17Q9NVC6 651 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ANO10Q9NW15 660 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 NDE1Q9NXR1 346 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 PLEK2Q9NYT0 353 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 IL37Q9NZH6 218 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 NUDT4Q9NZJ9 180 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 COQ4Q9Y3A0 265 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 WIPI2Q9Y4P8 454 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 RANBP2P49792 3224 aaKnown RBP3.59□□□□□ -1.84
HTT-210ENST00000512909 LOC105371242A0A075B767 164 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 IGKV3D-15A0A087WSY6 115 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SGK1O00141 431 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SIGLEC5O15389 551 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SYT7O43581 403 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 KERAO60938 352 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 APOEP02649 317 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 RETP07949 1114 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SFTPBP07988 381 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ZDHHC11BP0C7U3 371 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 PNMA6AP0CW24 399 aaPredicted RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 ANPEPP15144 967 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ACKR3P25106 362 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 CASP3P42574 277 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 OR1D5P58170 312 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 DAOAP59103 153 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 POLR2FP61218 127 aaKnown RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 TPM4P67936 248 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 GFPT1Q06210 699 aaPredicted RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 RBBP4Q09028 425 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 PPP1R8Q12972 351 aaKnown RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 ECSCRQ19T08 205 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 FILIP1LQ4L180 1135 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 PRAMEF8Q5VWM4 474 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 KCTD11Q693B1 232 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SCYL2Q6P3W7 929 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 CD164L2Q6UWJ8 174 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 LRRC31Q6UY01 552 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ERICH1Q86X53 443 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 CACUL1Q86Y37 369 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 PEX5LQ8IYB4 626 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 DEFB106AQ8N104 65 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ATP6V0D2Q8N8Y2 350 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SUMF1Q8NBK3 374 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ZBTB44Q8NCP5 570 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 TMEM35BQ8NCS4 154 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ICA1LQ8NDH6 482 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 NEK11Q8NG66 645 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 OR5M9Q8NGP3 310 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 CABS1Q96KC9 395 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 NAP1L3Q99457 506 aaPredicted RBP3.58□□□□□ -1.84
HTT-210ENST00000512909 OSBPL8Q9BZF1 889 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 ELOVL2Q9NXB9 296 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SUN2Q9UH99 717 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 MMP17Q9ULZ9 603 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 MYH11P35749 1972 aa3.58□□□□□ -1.84
HTT-210ENST00000512909 SZT2Q5T011 3432 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 A0A0J9YWU9 116 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 FAM92AA1XBS5 289 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 MEI4A8MW99 385 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 F5H5T6 163 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 GOLGA6L19H0YKK7 550 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 CCSO14618 274 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 PSMD3O43242 534 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 OLFM2O95897 454 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 MBD3O95983 291 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 CISD3P0C7P0 127 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SLC2A3P11169 496 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 HLA-EP13747 358 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 STMN1P16949 149 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 UGT1A4P22310 534 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SSR1P43307 286 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 CLK1P49759 484 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 KLK7P49862 253 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SULT1E1P49888 294 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 BTG1P62324 171 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 TRA2AQ13595 282 aaKnown RBP eCLIP3.57□□□□□ -1.84
HTT-210ENST00000512909 C3AR1Q16581 482 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 STX1AQ16623 288 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 MRGPRG-AS1Q2M3A8 158 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 KRTAP24-1Q3LI83 254 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 C2CD6Q53TS8 623 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SPANXN4Q5MJ08 99 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 CCDC183Q5T5S1 534 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms