RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GGTA1PQ4G0N0 100 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 TECRLQ5HYJ1 363 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GTF2IRD2BQ6EKJ0 949 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 LETMD1Q6P1Q0 360 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 METTL2BQ6P1Q9 378 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 APOOLQ6UXV4 268 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 ESPNLQ6ZVH7 1005 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GTF2IRD2Q86UP8 949 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 SAMD14Q8IZD0 417 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GTPBP8Q8N3Z3 284 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 OR2W6PQ8NHA6 318 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 FBF1Q8TES7 1133 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 FAM168AQ92567 244 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 OSTF1Q92882 214 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 REXO5Q96IC2 774 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GPR78Q96P69 363 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 BBS4Q96RK4 519 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 GRIP2Q9C0E4 1043 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 BRF2Q9HAW0 419 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 Q9N2J8 555 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 SLC35C2Q9NQQ7 365 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 KLHL13Q9P2N7 655 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 SNX6Q9UNH7 406 aa11.73□□□□□ -0.53
POLR2J3-216ENST00000511773 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 SLC35F4A4IF30 521 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PPP6CO00743 305 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 JUNP05412 331 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 COL6A2P12110 1019 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 TCP1P17987 556 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 MPIP34949 423 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 SFTPDP35247 375 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 ZNF41P51814 821 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 CARD18P57730 90 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 RAC1P63000 192 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 ITGADQ13349 1161 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PPA1Q15181 289 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 RAB35Q15286 201 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PLPPR5Q32ZL2 321 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 TCHHL1Q5QJ38 904 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PDSS1Q5T2R2 415 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 CYS1Q717R9 158 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PIAS4Q8N2W9 510 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 CDC26Q8NHZ8 85 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 RNF128Q8TEB7 428 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 EBPLQ9BY08 206 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 SRXN1Q9BYN0 137 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 PLA2G12AQ9BZM1 189 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 VPS11Q9H270 941 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 VPS29Q9UBQ0 182 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 DMGDHQ9UI17 866 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 MCM8Q9UJA3 840 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 MRTO4Q9UKD2 239 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 POU2F3Q9UKI9 436 aa11.72□□□□□ -0.53
POLR2J3-216ENST00000511773 A0A087WZY1 265 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 LOC100289279A0A1B0GTE1 492 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 A0A1W2PRB8 838 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 GXYLT2A0PJZ3 443 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 LY6HO94772 140 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 GSTA2P09210 222 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 PABPC4LP0CB38 370 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 CHN1P15882 459 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 HNF1AP20823 631 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 SHC1P29353 583 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 STX2P32856 288 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 NCBP2P52298 156 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 PRR5P85299 388 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 SPOCK1Q08629 439 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 P2RY6Q15077 328 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 RNPS1Q15287 305 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 C11orf71Q6IPW1 123 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 CCDC91Q7Z6B0 441 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 LILRA2Q8N149 483 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 PLD6Q8N2A8 252 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 SH3YL1Q96HL8 342 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 KLHL15Q96M94 604 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 KLHDC3Q9BQ90 382 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 EML4Q9HC35 981 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 MED17Q9NVC6 651 aa11.71□□□□□ -0.53
POLR2J3-216ENST00000511773 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms