RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF840PA6NDX5 716 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 I3L1I5 382 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 PDLIM1O00151 329 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TULP2O00295 520 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A6P0DMU7 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A5P0DMU8 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A7P0DMV0 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A8P0DMV1 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A9P0DMV2 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 PTGS2P35354 604 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 GPR4P46093 362 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 XCR1P46094 333 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SLC25A11Q02978 314 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 RING1Q06587 406 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 GALNT2Q10471 571 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 RPA4Q13156 261 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A2Q5DJT8 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A1Q5HYN5 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 ZNF585AQ6P3V2 769 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 MOB3CQ70IA8 216 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TMEM25Q86YD3 366 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 RBMXL3Q8N7X1 1067 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 CT45A3Q8NHU0 189 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 PIGCQ92535 297 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 C1orf74Q96LT6 269 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 LMF1Q96S06 567 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 ULBP2Q9BZM5 246 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 RETREG1Q9H6L5 497 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 MTHFD2LQ9H903 347 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 TXNRD2Q9NNW7 524 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 VSX1Q9NZR4 365 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 GNG12Q9UBI6 72 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 FAM96BQ9Y3D0 163 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 NFS1Q9Y697 457 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 DLEC1Q9Y238 1755 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SLC9B1P1A6NJY1 282 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 A8MVM7 634 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 B4DXG7 233 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 E9PI62 339 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 I3L521 148 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 YKT6O15498 198 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 WNT11O96014 354 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 OPN1LWP04000 364 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 HTR2AP28223 471 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 GJA5P36382 358 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 ALDH3B1P43353 468 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 EFNA3P52797 238 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CLDN2P57739 230 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TAS2R20P59543 309 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 XKR5Q6UX68 686 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 MEX3BQ6ZN04 569 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP38-203ENST00000511739 ZNF704Q6ZNC4 412 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 SGPP2Q8IWX5 399 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 PIAS4Q8N2W9 510 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 PSMF1Q92530 271 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TAMM41Q96BW9 452 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 XYLT2Q9H1B5 865 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SOX17Q9H6I2 414 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 KCNK12Q9HB15 430 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 STEAP1Q9UHE8 339 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 OARD1Q9Y530 152 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 MYH9P35579 1960 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 HMX3A6NHT5 357 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 KLRC4-KLRK1H3BQV0 150 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 M0R233 179 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SCRG1O75711 98 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 STC2O76061 302 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 RAD52P43351 418 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 IDH3GP51553 393 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 PRPS1P60891 318 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 MBTPS1Q14703 1052 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 PAFAH1B3Q15102 231 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 SSX2Q16385 188 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 UPP1Q16831 310 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TLDC1Q6P9B6 456 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 C14orf80Q86SX3 495 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 LHFPL3Q86UP9 236 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 HS3ST5Q8IZT8 346 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TEX26Q8N6G2 289 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 IQCF1Q8N6M8 205 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 FAM83FQ8NEG4 500 aaPredicted RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 MDGA1Q8NFP4 955 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 DMBX1Q8NFW5 382 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 OR2T27Q8NH04 317 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 EGLN1Q9GZT9 426 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 HRASLSQ9HDD0 168 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 ATP13A2Q9NQ11 1180 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 TM7SF3Q9NS93 570 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 GFOD1Q9NXC2 390 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 B3GNT3Q9Y2A9 372 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 FBXO7Q9Y3I1 522 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 LSM5Q9Y4Y9 91 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 DDX60LQ5H9U9 1706 aaKnown RBP5.46□□□□□ -1.54
USP38-203ENST00000511739 WNK3Q9BYP7 1800 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SGK494L7N484 410 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 SLC43A1O75387 559 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 RDH16O75452 317 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 CNIH1O95406 144 aa5.46□□□□□ -1.54
USP38-203ENST00000511739 F7P08709 466 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms