RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ZNF441Q8N8Z8 693 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 PIK3C3Q8NEB9 887 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 GPR32P1Q8NGA4 272 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 NUBPLQ8TB37 319 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 GPR151Q8TDV0 419 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF721Q8TF20 911 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 TMBIM1Q969X1 311 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 CRB3Q9BUF7 120 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 CNPPD1Q9BV87 410 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 SPRY4Q9C004 299 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 REEP1Q9H902 201 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 APMAPQ9HDC9 416 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 SLC13A4Q9UKG4 626 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 CBLCQ9ULV8 474 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 B3GALT1Q9Y5Z6 326 aa8.42□□□□□ -1.06
NR1I3-228ENST00000511676 ATMQ13315 3056 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 A0A1W2PRQ8 180 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 NPIPB9F8W1W9 429 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 H0YAE9 185 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 DENRO43583 198 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 E2F6O75461 281 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 STK17BO94768 372 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 OPN1SWP03999 348 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ALPLP05186 524 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CT45A8P0DMV1 189 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CT45A9P0DMV2 189 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 UQCRBP14927 111 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 LIFP15018 202 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 NAGAP17050 411 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CDH2P19022 906 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 SSTR4P31391 388 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 GABRA3P34903 492 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 LIMS1P48059 325 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 GPR143P51810 404 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 PGDP52209 483 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 RAD23AP54725 363 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CASP9P55211 416 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 PPP2R2BQ00005 443 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CHRNEQ04844 493 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 DAG1Q14118 895 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 DGCR6Q14129 220 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 EBPQ15125 230 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 TAF11Q15544 211 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 EXT1Q16394 746 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CT45A2Q5DJT8 189 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 RPS26P11Q5JNZ5 115 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CPEB2Q7Z5Q1 589 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 GALNT10Q86SR1 603 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 VASH2Q86V25 355 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 SLC44A2Q8IWA5 706 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF440Q8IYI8 595 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 CBR4Q8N4T8 237 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF527Q8NB42 609 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 NFAM1Q8NET5 270 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 B3GNT7Q8NFL0 401 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 OR5L2Q8NGL0 311 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 OR2Y1Q8NGV0 311 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 OR52P1PQ8NH57 321 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 TSLPQ969D9 159 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 VMP1Q96GC9 406 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 PRRC1Q96M27 445 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 IP6K3Q96PC2 410 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 NR1H4Q96RI1 486 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 LPAR4Q99677 370 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ARHGDIGQ99819 225 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 TACO1Q9BSH4 297 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 YIPF4Q9BSR8 244 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 SEMA6AQ9H2E6 1030 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 COQ10BQ9H8M1 238 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 PNO1Q9NRX1 252 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 SMPD3Q9NY59 655 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 FOXJ2Q9P0K8 574 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 TESQ9UGI8 421 aaKnown RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 C3orf18Q9UK00 162 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ABCG2Q9UNQ0 655 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF443Q9Y2A4 671 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-228ENST00000511676 LYVE1Q9Y5Y7 322 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 KCNE3Q9Y6H6 103 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 V9GYQ6 96 aa8.41□□□□□ -1.06
NR1I3-228ENST00000511676 MYO18BQ8IUG5 2567 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 A0A1W2PQD3 144 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 CDHR4A6H8M9 788 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SOCS2O14508 198 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 EI24O14681 340 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 FCMRO60667 390 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 IL33O95760 270 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ANXA8P13928 327 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 IL7RP16871 459 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 PTGER1P34995 402 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ATP12AP54707 1039 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 RRADP55042 308 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 AQP4P55087 323 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 EEF1A1P68104 462 aaKnown RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SRSF1Q07955 248 aaKnown RBP eCLIP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 LRRC36Q1X8D7 754 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 FLYWCH1Q4VC44 716 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SFT2D3Q587I9 215 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 HLA-DQA1Q5Y7H0 255 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms