RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 S1PR1P21453 382 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 APEX1P27695 318 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 IL13P35225 146 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RFC2P35250 354 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 HAAOP46952 286 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SUCLG1P53597 346 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 TMEM62Q0P6H9 643 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 INPP5JQ15735 1006 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 MPPED2Q15777 294 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 DUOXA1Q1HG43 343 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 LEXMQ3ZCV2 418 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 BCL2L15Q5TBC7 163 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RPL7L1Q6DKI1 246 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 ALKBH2Q6NS38 261 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ADAM5Q6NVV9 412 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ZNF600Q6ZNG1 722 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 UBE3DQ7Z6J8 389 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR5L1Q8NGL2 311 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SFXN5Q8TD22 340 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ZFP90Q8TF47 636 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RGMAQ96B86 450 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SLC46A1Q96NT5 459 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 LXNQ9BS40 222 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 C11orf84Q9BUA3 381 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 MMP26Q9NRE1 261 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 hCG_1818297A0A087WSY0 165 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PPV4 95 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RFPL4AA6NLU0 287 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TRDCB7Z8K6 153 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RFPL4AL1F8VTS6 287 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 KCNJ13O60928 360 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ACSM4P0C7M7 580 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GAAP10253 952 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ZNF25P17030 456 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 RPL7P18124 248 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 FMO3P31513 532 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 PTH2RP49190 550 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 MTNR1BP49286 362 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GTF2A2P52657 109 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ZNF143P52747 638 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 TMPRSS3P57727 454 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ERVFRD-1P60508 538 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 UBE2G2P60604 165 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TIMM10P62072 90 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RPS14P62263 151 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 MZT1Q08AG7 82 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 MELKQ14680 651 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 PMCHL1Q16048 86 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 AGBL4Q5VU57 503 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SPATC1Q76KD6 591 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 CHST9Q7L1S5 443 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 XYLT1Q86Y38 959 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 NPAS3Q8IXF0 933 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 KIAA1958Q8N8K9 716 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 BOLLQ8N9W6 283 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 SLC44A5Q8NCS7 719 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GPRC5AQ8NFJ5 357 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR4B1Q8NGF8 309 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR13F1Q8NGS4 319 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR2G2Q8NGZ5 317 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR14L1PQ8NHC6 308 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 PAQR8Q8TEZ7 354 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SPRYD4Q8WW59 207 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SAT2Q96F10 170 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 RBM18Q96H35 190 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 SLC35G5Q96KT7 338 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 NSUN5Q96P11 429 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 LYSMD1Q96S90 227 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TMPRSS13Q9BYE2 586 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ASB7Q9H672 318 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TAF9BQ9HBM6 251 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SPACA1Q9HBV2 294 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR2S2Q9NQN1 319 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 MSRAQ9UJ68 235 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 CD207Q9UJ71 328 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 CAMK2AQ9UQM7 478 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TRAPPC4Q9Y296 219 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 UBE2J1Q9Y385 318 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 OR51B4Q9Y5P0 310 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 HEMK1Q9Y5R4 338 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 TAF1LQ8IZX4 1826 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 A0A1B0GUH1 482 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TRAPPC2LH3BP13 241 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 CACNB4O00305 520 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 TP73O15350 636 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 NUPL2O15504 423 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 GABARAPO95166 117 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SFTPBP07988 381 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 MMP2P08253 660 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 LINC00614P0C842 121 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ARSBP15848 533 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RHCEP18577 417 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 PRDX3P30048 256 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 CDC25AP30304 524 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GZMKP49863 264 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 WNT4P56705 351 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 EMX2Q04743 252 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SLAMF1Q13291 335 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms