RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 OCRLQ01968 901 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 LCP2Q13094 533 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 DECR1Q16698 335 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 GLYR1Q49A26 553 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 BEX5Q5H9J7 111 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 DNM1P46Q6ZS02 220 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 CHMP1BQ7LBR1 199 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 NUFIP2Q7Z417 695 aaKnown RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 SAMD14Q8IZD0 417 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 OR2T11Q8NH01 316 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 FAM110BQ8TC76 370 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 RNF145Q96MT1 663 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 FMO2Q99518 471 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 SRXN1Q9BYN0 137 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 ACTR6Q9GZN1 396 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 MID1IP1Q9NPA3 183 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 EQTNQ9NQ60 294 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 GIMAP4Q9NUV9 329 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 SENP1Q9P0U3 644 aa11.93□□□□□ -0.5
DDX41-210ENST00000509576 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
DDX41-210ENST00000509576 A0A1W2PRB8 838 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 RNF223E7ERA6 249 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 ENO1P06733 434 aaKnown RBP11.92□□□□□ -0.5
DDX41-210ENST00000509576 EFNA1P20827 205 aaPredicted RBP11.92□□□□□ -0.5
DDX41-210ENST00000509576 PKNOX1P55347 436 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 EEFSECP57772 596 aaKnown RBP11.92□□□□□ -0.5
DDX41-210ENST00000509576 PSPHP78330 225 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 DUSP5Q16690 384 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 NOXRED1Q6NXP6 359 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 GABRG1Q8N1C3 465 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 MMGT1Q8N4V1 131 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 SLC16A11Q8NCK7 471 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 ABHD3Q8WU67 409 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 AKAP1Q92667 903 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX41-210ENST00000509576 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
DDX41-210ENST00000509576 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 Q9N2J8 555 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 MED17Q9NVC6 651 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 MALRD1Q5VYJ5 2156 aa11.92□□□□□ -0.5
DDX41-210ENST00000509576 A0A1W2PPM1 405 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 LINC01387J3KSC0 135 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 KCNK2O95069 426 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 FAM153BP0C7A2 387 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 ZNF17P17021 662 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 PSMB1P20618 241 aaKnown RBP11.91□□□□□ -0.5
DDX41-210ENST00000509576 CDKN1AP38936 164 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 FRKP42685 505 aaPredicted RBP11.91□□□□□ -0.5
DDX41-210ENST00000509576 ATP5J2P56134 94 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 C17orf67Q0P5P2 114 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 HSPB3Q12988 150 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SGCBQ16585 318 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 FAM153CQ494X1 144 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SPDYAQ5MJ70 313 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 CCNJQ5T5M9 372 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 PPP4R4Q6NUP7 873 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 TFAP2EQ6VUC0 442 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 IFT81Q8WYA0 676 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SH3YL1Q96HL8 342 aaPredicted RBP11.91□□□□□ -0.5
DDX41-210ENST00000509576 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 TBL1XR1Q9BZK7 514 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SHCBP1LQ9BZQ2 653 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 TUBB1Q9H4B7 451 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 PTGES2Q9H7Z7 377 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 COQ10BQ9H8M1 238 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SDHAF3Q9NRP4 125 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 SIRT3Q9NTG7 399 aaPredicted RBP11.91□□□□□ -0.5
DDX41-210ENST00000509576 NTMQ9P121 344 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 GRID1Q9ULK0 1009 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 LAMP3Q9UQV4 416 aa11.91□□□□□ -0.5
DDX41-210ENST00000509576 A0A087WUV0 522 aaPredicted RBP11.9□□□□□ -0.5
DDX41-210ENST00000509576 A0A096LNT2 108 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 NPIPA5A0A0B4J1W7 369 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 EXOC1LA0A1B0GW35 172 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 C7orf72A4D263 438 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 ZNF814B7Z6K7 855 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 NPIPA7E9PJI5 369 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 CD8AP01732 235 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 NPIPA8P0DM63 369 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 PYGBP11216 843 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 TAC1P20366 129 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 PRIM2P49643 509 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
DDX41-210ENST00000509576 SLC29A2Q14542 456 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 TAB1Q15750 504 aa11.9□□□□□ -0.5
DDX41-210ENST00000509576 TOMM34Q15785 309 aaPredicted RBP11.9□□□□□ -0.5
DDX41-210ENST00000509576 ZNF239Q16600 458 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms