RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 OR6C70A6NIJ9 312 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 C19orf84I3L1E1 186 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 HMGN4O00479 90 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CFLARO15519 480 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 OIP5O43482 229 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SLITRK5O94991 958 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 KCNK2O95069 426 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 IL6P05231 212 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 HOXD4P09016 255 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 GLI4P10075 376 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 GABRA3P34903 492 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 PTGER4P35408 488 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SOAT1P35610 550 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SNTA1Q13424 505 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 TP53BP2Q13625 1128 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SF3B4Q15427 424 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 DECR1Q16698 335 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 DPY19L1Q2PZI1 675 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 EIPR1Q53HC9 387 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 WIPI1Q5MNZ9 446 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CDC73Q6P1J9 531 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 TNFAIP8L2Q6P589 184 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 FIGNL1Q6PIW4 674 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 MEX3BQ6ZN04 569 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 GDF7Q7Z4P5 450 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 HMGN2P46Q86SG4 172 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 YRDCQ86U90 279 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 MTDHQ86UE4 582 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 RNF130Q86XS8 419 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 ULK2Q8IYT8 1036 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 OR14L1PQ8NHC6 308 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 LILRB4Q8NHJ6 448 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 MIPOL1Q8TD10 442 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 RAB8BQ92930 207 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 ZG16BQ96DA0 208 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 RMND5BQ96G75 393 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CCT8L2Q96SF2 557 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 NPAS1Q99742 590 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CPPED1Q9BRF8 314 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SLC35A5Q9BS91 424 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 UCK2Q9BZX2 261 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 OR51I1Q9H343 314 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 C3orf14Q9HBI5 128 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 Q9N2J8 555 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 ATAD3AQ9NVI7 634 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 MRTO4Q9UKD2 239 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CAMK2AQ9UQM7 478 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 SLC6A5Q9Y345 797 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 PCNX1Q96RV3 2341 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 CELSR2Q9HCU4 2923 aa7.96□□□□□ -1.14
PDLIM5-213ENST00000509357 ZNF407Q9C0G0 2248 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 A0A1W2PP18 115 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 AHRRA9YTQ3 701 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 NPIPB9F8W1W9 429 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 SNPHO15079 494 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 FADS1O60427 444 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 FCMRO60667 390 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 CBR3O75828 277 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 HPNP05981 417 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 CHRM4P08173 479 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 ZCCHC18P0CG32 403 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 OR12D1P0DN82 309 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 ETFAP13804 333 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PRF1P14222 555 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 ENDOUP21128 410 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 UQCRC2P22695 453 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 TCEA1P23193 301 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 GZMMP51124 257 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PSMD4P55036 377 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 GTF3C1Q12789 2109 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 CAPRIN1Q14444 709 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 MAPK14Q16539 360 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 GRAMD1BQ3KR37 738 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 ANXA8L1Q5VT79 327 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 METTL21CQ5VZV1 264 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 REP15Q6BDI9 236 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 OR5M10Q6IEU7 315 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 HEPHL1Q6MZM0 1159 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 C8orf82Q6P1X6 216 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 MSANTD1Q6ZTZ1 278 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 COMTD1Q86VU5 262 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 SNX32Q86XE0 403 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PLCZ1Q86YW0 608 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PM20D2Q8IYS1 436 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 DPP10Q8N608 796 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 CDRT4Q8N9R6 151 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 FAM83FQ8NEG4 500 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 OR4K17Q8NGC6 315 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 OR4C3Q8NH37 302 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 GPR151Q8TDV0 419 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 SLC9A6Q92581 669 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 ABTB1Q969K4 478 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 SLC35G5Q96KT7 338 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PANX1Q96RD7 426 aa7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 PRPF18Q99633 342 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-213ENST00000509357 TIMP4Q99727 224 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms