RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 UGP2Q16851 508 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 CDO1Q16878 200 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ODF4Q2M2E3 257 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 UGT3A2Q3SY77 523 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PARP15Q460N3 678 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 TFDP3Q5H9I0 405 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 EOGTQ5NDL2 527 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 NCBP2-AS2Q69YL0 99 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SLC25A47Q6Q0C1 308 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 FIP1L1Q6UN15 594 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PTAR1Q7Z6K3 402 aaPredicted RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 RABEPKQ7Z6M1 372 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 MTERF4Q7Z6M4 381 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SLC13A5Q86YT5 568 aaPredicted RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 LRRC49Q8IUZ0 686 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 MFN1Q8IWA4 741 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 TEX26Q8N6G2 289 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 NOA1Q8NC60 698 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 OR13C3Q8NGS6 347 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 OR2A12Q8NGT7 310 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 DDI1Q8WTU0 396 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 KRT35Q92764 455 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ECHDC3Q96DC8 303 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 RBM41Q96IZ5 413 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 MS4A14Q96JA4 679 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 C10orf90Q96M02 699 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 NSMCE3Q96MG7 304 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF578Q96N58 590 aaPredicted RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SFXN2Q96NB2 322 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 RPRD1AQ96P16 312 aaPredicted RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ABHD1Q96SE0 405 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 KRT12Q99456 494 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SEPHS2Q99611 448 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PARD6BQ9BYG5 372 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 FAM129AQ9BZQ8 928 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 CCDC68Q9H2F9 335 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 GOLPH3Q9H4A6 298 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 OPA3Q9H6K4 179 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ANKZF1Q9H8Y5 726 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 ETNK2Q9NVF9 386 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 GPATCH2LQ9NWQ4 482 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 OR6C2Q9NZP2 312 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 BCCIPQ9P287 314 aaKnown RBP eCLIP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 LHX3Q9UBR4 397 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SLC12A6Q9UHW9 1150 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 STUB1Q9UNE7 303 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PACSIN2Q9UNF0 486 aaPredicted RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 PPIEQ9UNP9 301 aaKnown RBP3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SNX8Q9Y5X2 465 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 SMAD5-AS1Q9Y6J3 95 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
NFKB1-208ENST00000509165 hCG_1818297A0A087WSY0 165 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 EDDM13A0A1B0GTR0 161 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 A0A1W2PPM1 405 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZSCAN5CA6NGD5 496 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 C2orf81A6NN90 581 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 RNF103O00237 685 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 TRAFD1O14545 582 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF195O14628 629 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SLC7A4O43246 635 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 AHCYL1O43865 530 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 PRPSAP2O60256 369 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SNAP91O60641 907 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ERLIN1O75477 346 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF189O75820 626 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 GSRP00390 522 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 IGHV2-70P01814 119 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ATP5BP06576 529 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 CTSLP07711 333 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZSCAN5DPP0CG00 497 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 POLR2EP19388 210 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 CYP2A7P20853 494 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 CDH3P22223 829 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 JAK1P23458 1154 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 KDELR1P24390 212 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 OR1E1P30953 314 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 FNTAP49354 379 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 CSNK1EP49674 416 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 STK19P49842 368 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 RPS14P62263 151 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 IFI35P80217 286 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 IL10RBQ08334 325 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 PPIDQ08752 370 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ZNF177Q13360 481 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 CUL1Q13616 776 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ELAVL3Q14576 367 aaKnown RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 RFTN1Q14699 578 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SIX1Q15475 284 aaPredicted RBP3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SNAPC1Q16533 368 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 ANKRD20A8PQ5CZ79 823 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 SEL1L2Q5TEA6 688 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 C22orf39Q6P5X5 142 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 EMBQ6PCB8 327 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 TMEM207Q6UWW9 146 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 LRRC31Q6UY01 552 aa3.42□□□□□ -1.86
NFKB1-208ENST00000509165 KDM7AQ6ZMT4 941 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms