RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZNF708P17019 499 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 ZNF17P17021 662 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 HK1P19367 917 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 UQCRC2P22695 453 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 ADH7P40394 386 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 LHX2P50458 406 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 ANXA11P50995 505 aaKnown RBP18.02■□□□□ 0.48
SFXN1-209ENST00000508290 FAM174BQ3ZCQ3 159 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 PDCD4Q53EL6 469 aaKnown RBP18.02■□□□□ 0.48
SFXN1-209ENST00000508290 SPANXN4Q5MJ08 99 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 DCST1Q5T197 706 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 DCST2Q5T1A1 773 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 RAET1LQ5VY80 246 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 GDF7Q7Z4P5 450 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 C6orf120Q7Z4R8 191 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 CLECL1Q8IZS7 167 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 MEIOBQ8N635 442 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 CCDC115Q96NT0 180 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 TRIB1Q96RU8 372 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 TREX2Q9BQ50 279 aaPredicted RBP18.02■□□□□ 0.48
SFXN1-209ENST00000508290 WDR55Q9H6Y2 383 aaPredicted RBP18.02■□□□□ 0.48
SFXN1-209ENST00000508290 EXD2Q9NVH0 621 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 GPR45Q9Y5Y3 372 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 CENPEQ02224 2701 aa18.02■□□□□ 0.48
SFXN1-209ENST00000508290 NAV2Q8IVL1 2488 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 PHF3Q92576 2039 aaKnown RBP18.01■□□□□ 0.47
SFXN1-209ENST00000508290 C7orf72A4D263 438 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 FAM90A27PA6NNH2 459 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 IL18BPO95998 194 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 IL6P05231 212 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 MATN1P21941 496 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 MAGEA8P43361 318 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 NXNQ6DKJ4 435 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 APOOLQ6UXV4 268 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 SEM1Q6ZVN7 128 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 CHMP1BQ7LBR1 199 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 ADGRE4PQ86SQ3 457 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 CHDHQ8NE62 594 aaPredicted RBP18.01■□□□□ 0.47
SFXN1-209ENST00000508290 DYDC1Q8WWB3 177 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 WNT2BQ93097 391 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 ZBTB8AQ96BR9 441 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 SLC35G5Q96KT7 338 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 OR7D2Q96RA2 312 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 MED11Q9P086 117 aa18.01■□□□□ 0.47
SFXN1-209ENST00000508290 FOXD3Q9UJU5 478 aaPredicted RBP18.01■□□□□ 0.47
SFXN1-209ENST00000508290 NCKAP5O14513 1909 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 GOLGA8QA0A0J9YX86 632 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 GOLGA8OA6NCC3 632 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 GOLGA8NF8WBI6 632 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 PGRP06401 933 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 IGFBP2P18065 325 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 POU3F2P20265 443 aaPredicted RBP18■□□□□ 0.47
SFXN1-209ENST00000508290 OPRM1P35372 400 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 SUMO3P55854 103 aaPredicted RBP18■□□□□ 0.47
SFXN1-209ENST00000508290 CLDN18P56856 261 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 B3GALT5-AS1P59052 145 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 IRX1P78414 480 aaPredicted RBP18■□□□□ 0.47
SFXN1-209ENST00000508290 TFF3Q07654 80 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 FLYWCH1Q4VC44 716 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 TTMPQ5BVD1 217 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 ATAD3BQ5T9A4 648 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 MSANTD1Q6ZTZ1 278 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 MCEMP1Q8IX19 187 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 OR5AK3PQ8NH89 298 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 NUDT8Q8WV74 236 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 RTN4RQ9BZR6 473 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 NMUR2Q9GZQ4 415 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 POLE3Q9NRF9 147 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 SDR39U1Q9NRG7 319 aaPredicted RBP18■□□□□ 0.47
SFXN1-209ENST00000508290 ZIM2Q9NZV7 527 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 RPH3AQ9Y2J0 694 aaPredicted RBP18■□□□□ 0.47
SFXN1-209ENST00000508290 AP4B1Q9Y6B7 739 aa18■□□□□ 0.47
SFXN1-209ENST00000508290 PCNX1Q96RV3 2341 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 B4DXG7 233 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 UBDO15205 165 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 STX11O75558 287 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 SSTR2P30874 369 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 EIF1P41567 113 aaKnown RBP17.99■□□□□ 0.47
SFXN1-209ENST00000508290 ZNF41P51814 821 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-209ENST00000508290 ATP12AP54707 1039 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 UFM1P61960 85 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 FBXL19-AS1Q494R0 122 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 CCNJQ5T5M9 372 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 OR2A2Q6IF42 318 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 NEURL3Q96EH8 262 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 C14orf79Q96F83 325 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 OTUB1Q96FW1 271 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-209ENST00000508290 PANX1Q96RD7 426 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 TUBA1CQ9BQE3 449 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 INTS9Q9NV88 658 aaKnown RBP17.99■□□□□ 0.47
SFXN1-209ENST00000508290 PAQR5Q9NXK6 330 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-209ENST00000508290 USH1CQ9Y6N9 552 aa17.99■□□□□ 0.47
SFXN1-209ENST00000508290 OR2M5A3KFT3 312 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 C19orf84I3L1E1 186 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 HCRTR2O43614 444 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 DIAPH2O60879 1101 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 SLC22A3O75751 556 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 CPSF4O95639 269 aaKnown RBP17.98■□□□□ 0.47
SFXN1-209ENST00000508290 CTSSP25774 331 aa17.98■□□□□ 0.47
SFXN1-209ENST00000508290 CHI3L1P36222 383 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms