RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BCKDHAP12694 445 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CPN1P15169 458 aa2.56□□□□□ -2
LSM6-205ENST00000507449 TPSB2P20231 275 aa2.56□□□□□ -2
LSM6-205ENST00000507449 GDF1P27539 372 aa2.56□□□□□ -2
LSM6-205ENST00000507449 MAGEA5P43359 124 aa2.56□□□□□ -2
LSM6-205ENST00000507449 XCR1P46094 333 aa2.56□□□□□ -2
LSM6-205ENST00000507449 STARP49675 285 aa2.56□□□□□ -2
LSM6-205ENST00000507449 SLC25A1P53007 311 aa2.56□□□□□ -2
LSM6-205ENST00000507449 RND3P61587 244 aa2.56□□□□□ -2
LSM6-205ENST00000507449 ATXN7L3Q14CW9 347 aaPredicted RBP2.56□□□□□ -2
LSM6-205ENST00000507449 TPSAB1Q15661 275 aa2.56□□□□□ -2
LSM6-205ENST00000507449 MAPK6Q16659 721 aa2.56□□□□□ -2
LSM6-205ENST00000507449 QRICH1Q2TAL8 776 aa2.56□□□□□ -2
LSM6-205ENST00000507449 TIGITQ495A1 244 aa2.56□□□□□ -2
LSM6-205ENST00000507449 UTF1Q5T230 341 aa2.56□□□□□ -2
LSM6-205ENST00000507449 MEDAGQ5VYS4 303 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CES3Q6UWW8 571 aa2.56□□□□□ -2
LSM6-205ENST00000507449 BAIAP2L2Q6UXY1 529 aa2.56□□□□□ -2
LSM6-205ENST00000507449 DPY19L4Q7Z388 723 aa2.56□□□□□ -2
LSM6-205ENST00000507449 IFNEQ86WN2 208 aa2.56□□□□□ -2
LSM6-205ENST00000507449 LYG1Q8N1E2 194 aa2.56□□□□□ -2
LSM6-205ENST00000507449 GPR137CQ8N3F9 429 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CD177Q8N6Q3 437 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CSNK1A1LQ8N752 337 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CCDC26Q8TAB7 109 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CNIH3Q8TBE1 160 aa2.56□□□□□ -2
LSM6-205ENST00000507449 TFB1MQ8WVM0 346 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 TMEM80Q96HE8 168 aa2.56□□□□□ -2
LSM6-205ENST00000507449 AKR1E2Q96JD6 320 aa2.56□□□□□ -2
LSM6-205ENST00000507449 FEM1AQ9BSK4 669 aa2.56□□□□□ -2
LSM6-205ENST00000507449 DPH7Q9BTV6 452 aa2.56□□□□□ -2
LSM6-205ENST00000507449 PAXXQ9BUH6 204 aa2.56□□□□□ -2
LSM6-205ENST00000507449 COG4Q9H9E3 785 aa2.56□□□□□ -2
LSM6-205ENST00000507449 PNO1Q9NRX1 252 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 MRPL39Q9NYK5 338 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 GSTK1Q9Y2Q3 226 aa2.56□□□□□ -2
LSM6-205ENST00000507449 CARMIL1Q5VZK9 1371 aa2.56□□□□□ -2
LSM6-205ENST00000507449 COL2A1P02458 1487 aaPredicted RBP2.56□□□□□ -2
LSM6-205ENST00000507449 PPIAL4CA0A0B4J2A2 164 aa2.55□□□□□ -2
LSM6-205ENST00000507449 K7ENP7 123 aa2.55□□□□□ -2
LSM6-205ENST00000507449 CLDN5O00501 218 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ANGPT2O15123 496 aa2.55□□□□□ -2
LSM6-205ENST00000507449 GPAA1O43292 621 aa2.55□□□□□ -2
LSM6-205ENST00000507449 NOL3O60936 208 aaKnown RBP2.55□□□□□ -2
LSM6-205ENST00000507449 TRIM3O75382 744 aaPredicted RBP2.55□□□□□ -2
LSM6-205ENST00000507449 SCRG1O75711 98 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ANP32DO95626 131 aa2.55□□□□□ -2
LSM6-205ENST00000507449 F10P00742 488 aa2.55□□□□□ -2
LSM6-205ENST00000507449 CSF2P04141 144 aa2.55□□□□□ -2
LSM6-205ENST00000507449 CD55P08174 381 aa2.55□□□□□ -2
LSM6-205ENST00000507449 PPIAL4GP0DN37 164 aa2.55□□□□□ -2
LSM6-205ENST00000507449 CLUP10909 449 aa2.55□□□□□ -2
LSM6-205ENST00000507449 H2AFXP16104 143 aaPredicted RBP2.55□□□□□ -2
LSM6-205ENST00000507449 NT5EP21589 574 aa2.55□□□□□ -2
LSM6-205ENST00000507449 KIF5BP33176 963 aa2.55□□□□□ -2
LSM6-205ENST00000507449 SOX6P35712 828 aa2.55□□□□□ -2
LSM6-205ENST00000507449 FNTAP49354 379 aa2.55□□□□□ -2
LSM6-205ENST00000507449 MEOX2P50222 304 aa2.55□□□□□ -2
LSM6-205ENST00000507449 OSTNP61366 133 aa2.55□□□□□ -2
LSM6-205ENST00000507449 NUCB2P80303 420 aa2.55□□□□□ -2
LSM6-205ENST00000507449 EWSR1Q01844 656 aaKnown RBP eCLIP2.55□□□□□ -2
LSM6-205ENST00000507449 ST3GAL3Q11203 375 aa2.55□□□□□ -2
LSM6-205ENST00000507449 SNTB2Q13425 540 aaKnown RBP2.55□□□□□ -2
LSM6-205ENST00000507449 ASAH1Q13510 395 aa2.55□□□□□ -2
LSM6-205ENST00000507449 GLYR1Q49A26 553 aaPredicted RBP2.55□□□□□ -2
LSM6-205ENST00000507449 SLC22A10Q63ZE4 541 aa2.55□□□□□ -2
LSM6-205ENST00000507449 PYHIN1Q6K0P9 492 aa2.55□□□□□ -2
LSM6-205ENST00000507449 VITQ6UXI7 678 aa2.55□□□□□ -2
LSM6-205ENST00000507449 C2orf66Q6UXQ4 117 aa2.55□□□□□ -2
LSM6-205ENST00000507449 SERPINA9Q86WD7 417 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ZDHHC21Q8IVQ6 265 aa2.55□□□□□ -2
LSM6-205ENST00000507449 MCOLN2Q8IZK6 566 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ZSCAN4Q8NAM6 433 aaPredicted RBP2.55□□□□□ -2
LSM6-205ENST00000507449 ZNF540Q8NDQ6 660 aa2.55□□□□□ -2
LSM6-205ENST00000507449 IPMKQ8NFU5 416 aa2.55□□□□□ -2
LSM6-205ENST00000507449 SIGLEC12Q96PQ1 595 aa2.55□□□□□ -2
LSM6-205ENST00000507449 SLC30A2Q9BRI3 323 aa2.55□□□□□ -2
LSM6-205ENST00000507449 TPPP3Q9BW30 176 aa2.55□□□□□ -2
LSM6-205ENST00000507449 TSSK1BQ9BXA7 367 aa2.55□□□□□ -2
LSM6-205ENST00000507449 DEFB126Q9BYW3 111 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ELOVL4Q9GZR5 314 aa2.55□□□□□ -2
LSM6-205ENST00000507449 RAB33BQ9H082 229 aa2.55□□□□□ -2
LSM6-205ENST00000507449 POLD4Q9HCU8 107 aa2.55□□□□□ -2
LSM6-205ENST00000507449 ATP10DQ9P241 1426 aa2.55□□□□□ -2
LSM6-205ENST00000507449 XPO7Q9UIA9 1087 aaKnown RBP2.55□□□□□ -2
LSM6-205ENST00000507449 MMP24Q9Y5R2 645 aa2.55□□□□□ -2
LSM6-205ENST00000507449 FAM168BA1KXE4 195 aa2.54□□□□□ -2
LSM6-205ENST00000507449 NDC80O14777 642 aa2.54□□□□□ -2
LSM6-205ENST00000507449 XPO1O14980 1071 aaKnown RBP2.54□□□□□ -2
LSM6-205ENST00000507449 ZSCAN12O43309 604 aa2.54□□□□□ -2
LSM6-205ENST00000507449 MFN2O95140 757 aa2.54□□□□□ -2
LSM6-205ENST00000507449 PTMAP06454 111 aaKnown RBP2.54□□□□□ -2
LSM6-205ENST00000507449 HBQ1P09105 142 aa2.54□□□□□ -2
LSM6-205ENST00000507449 IQCF3P0C7M6 154 aa2.54□□□□□ -2
LSM6-205ENST00000507449 PDHBP11177 359 aa2.54□□□□□ -2
LSM6-205ENST00000507449 NTHL1P78549 312 aa2.54□□□□□ -2
LSM6-205ENST00000507449 VLDLRP98155 873 aa2.54□□□□□ -2
LSM6-205ENST00000507449 RGS1Q08116 209 aa2.54□□□□□ -2
LSM6-205ENST00000507449 PJVKQ0ZLH3 352 aa2.54□□□□□ -2
LSM6-205ENST00000507449 SERTAD2Q14140 314 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms