RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CPMP14384 443 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 PORP16435 677 aaPredicted RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 EDNRAP25101 427 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 EVI2BP34910 448 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 SFTPDP35247 375 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 OR3A2P47893 321 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 PNLIPRP2P54317 469 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 HADHBP55084 474 aaKnown RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 CORO7P57737 925 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 RAB10P61026 200 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 IRF8Q02556 426 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ZP4Q12836 540 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 CHIT1Q13231 466 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 LAPTM5Q13571 262 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 DOC2BQ14184 412 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 TRMT12Q53H54 448 aaKnown RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 HSP90AA5PQ58FG0 334 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ZNF628Q5EBL2 1059 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ARL13AQ5H913 290 aaPredicted RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 ZNF311Q5JNZ3 666 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 PAGE2BQ5JRK9 111 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ASPHD2Q6ICH7 369 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 C11orf87Q6NUJ2 197 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 FRA10AC1Q70Z53 315 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 FCRLAQ7L513 359 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 MARCH3Q86UD3 253 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 CARM1Q86X55 608 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 ZCCHC7Q8N3Z6 543 aaKnown RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 CDYL2Q8N8U2 506 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 CALML6Q8TD86 181 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 C1orf54Q8WWF1 131 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 NEU4Q8WWR8 484 aaPredicted RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 SLC25A28Q96A46 364 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 CENPKQ9BS16 269 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 EFCAB11Q9BUY7 163 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 RTN4RQ9BZR6 473 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 TIGARQ9NQ88 270 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 LYARQ9NX58 379 aaKnown RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 GPR55Q9Y2T6 319 aaPredicted RBP6.28□□□□□ -1.4
VCAN-207ENST00000507162 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 TCRBV7S3A2A0A539 114 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 B9A039 149 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 WNT9BO14905 357 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 LIASO43766 372 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 ERAL1O75616 437 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 TSPAN15O95858 294 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 OR4A8P0C604 315 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 SAGP10523 405 aaPredicted RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 ANPEPP15144 967 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 ME2P23368 584 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 CASP2P42575 452 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 GPR6P46095 362 aaPredicted RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 CLK3P49761 638 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 HNMTP50135 292 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 EMDP50402 254 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 RAC1P63000 192 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 MRPS22P82650 360 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 MYBPC1Q00872 1141 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 IL1RL1Q01638 556 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 MGAT2Q10469 447 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 OASLQ15646 514 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 KCTD19Q17RG1 926 aaPredicted RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 PRICKLE4Q2TBC4 344 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 TCHHL1Q5QJ38 904 aaPredicted RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 SH2D4BQ5SQS7 431 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 OR52E8Q6IFG1 317 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 RBM43Q6ZSC3 357 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 SPATC1Q76KD6 591 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 RETREG3Q86VR2 466 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 SLC44A2Q8IWA5 706 aaPredicted RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 SYT14Q8NB59 555 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 OR4N2Q8NGD1 307 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 RNF128Q8TEB7 428 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 WFDC12Q8WWY7 111 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 GTF3AQ92664 365 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
VCAN-207ENST00000507162 GBP4Q96PP9 640 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 NPAS1Q99742 590 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 ANKRA2Q9H9E1 313 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 BEX1Q9HBH7 125 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 FLRT3Q9NZU0 649 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 OR10H1Q9Y4A9 318 aa6.27□□□□□ -1.41
VCAN-207ENST00000507162 A0A0G2JMP0 313 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 A0A0X1KG70 313 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ZCWPW2A0A1B0GU75 182 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MAGEB16A2A368 324 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 SDR42E2A6NKP2 422 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 SLC22A31A6NKX4 558 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 PLPP1O14494 284 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 FADS1O60427 444 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MPZL1O95297 269 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CBX7O95931 251 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 TFP02787 698 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms