RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 NHSL2Q5HYW2 709 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 HEPHL1Q6MZM0 1159 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 ZNF585AQ6P3V2 769 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 SLC2A7Q6PXP3 512 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 FUNDC1Q8IVP5 155 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 ZNF614Q8N883 585 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 GATSQ8NAP1 163 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 PNPT1Q8TCS8 783 aaKnown RBP18.06■□□□□ 0.48
DDR1-259ENST00000507046 ZFP90Q8TF47 636 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 GTF2H4Q92759 462 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 RAB8BQ92930 207 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 ZNF350Q9GZX5 532 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 POLE3Q9NRF9 147 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 MRGBPQ9NV56 204 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 FLNCQ14315 2725 aa18.06■□□□□ 0.48
DDR1-259ENST00000507046 GTF3C1Q12789 2109 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 NPIPA5A0A0B4J1W7 369 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 NPIPA7E9PJI5 369 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 HMGN4O00479 90 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ACTL6AO96019 429 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 NPIPA8P0DM63 369 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 GABRA1P14867 456 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ACVR2AP27037 513 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 SMSP52788 366 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ZNF630Q2M218 657 aaPredicted RBP18.05■□□□□ 0.48
DDR1-259ENST00000507046 EMC4Q5J8M3 183 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 VASNQ6EMK4 673 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 TMEM211Q6ICI0 200 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 AAGABQ6PD74 315 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ENPP6Q6UWR7 440 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 MTERF4Q7Z6M4 381 aaKnown RBP18.05■□□□□ 0.48
DDR1-259ENST00000507046 PM20D2Q8IYS1 436 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ABTB1Q969K4 478 aaPredicted RBP18.05■□□□□ 0.48
DDR1-259ENST00000507046 ROPN1LQ96C74 230 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 SFXN2Q96NB2 322 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 UGT2B28Q9BY64 529 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 NMUR2Q9GZQ4 415 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 ZNF385DQ9H6B1 395 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 TPT1P8Q9HAU6 139 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 SLC6A13Q9NSD5 602 aa18.05■□□□□ 0.48
DDR1-259ENST00000507046 DNAJC13O75165 2243 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 A0A096LPI6 279 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 B4DXG7 233 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 HOXD4P09016 255 aaPredicted RBP18.04■□□□□ 0.48
DDR1-259ENST00000507046 BMP7P18075 431 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 HK1P19367 917 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 CAPN3P20807 821 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 TCEA1P23193 301 aaKnown RBP18.04■□□□□ 0.48
DDR1-259ENST00000507046 MSX1P28360 303 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 PTGER4P35408 488 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 GPR68Q15743 365 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 GTDC1Q4AE62 458 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 GPAT3Q53EU6 434 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 RAET1LQ5VY80 246 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 CGB2Q6NT52 195 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 PHOSPHO1Q8TCT1 267 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 C1GALT1C1Q96EU7 318 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 DMRTA2Q96SC8 542 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 TIMP4Q99727 224 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 RAD21L1Q9H4I0 556 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 ALKBH4Q9NXW9 302 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 KLHL14Q9P2G3 628 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 CAMK2AQ9UQM7 478 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 LIPT1Q9Y234 373 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 RPH3AQ9Y2J0 694 aaPredicted RBP18.04■□□□□ 0.48
DDR1-259ENST00000507046 WDR45Q9Y484 360 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 DTNAQ9Y4J8 743 aa18.04■□□□□ 0.48
DDR1-259ENST00000507046 FAM47E-STBD1D6RA91 191 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 NPIPB9F8W1W9 429 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 GMFGO60234 142 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 GUSBP08236 651 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 CRATP43155 626 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 SF3B4Q15427 424 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDR1-259ENST00000507046 CD226Q15762 336 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 KLHL26Q53HC5 615 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDR1-259ENST00000507046 C1orf185Q5T7R7 199 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 B3GNT6Q6ZMB0 384 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 ZNF808Q8N4W9 903 aaPredicted RBP18.03■□□□□ 0.48
DDR1-259ENST00000507046 OIT3Q8WWZ8 545 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 SH3YL1Q96HL8 342 aaPredicted RBP18.03■□□□□ 0.48
DDR1-259ENST00000507046 PRDM14Q9GZV8 571 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 PAIP1Q9H074 479 aaKnown RBP18.03■□□□□ 0.48
DDR1-259ENST00000507046 MKLN1Q9UL63 735 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 PCDHB14Q9Y5E9 798 aa18.03■□□□□ 0.48
DDR1-259ENST00000507046 A0A1W2PP18 115 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 ANGPT2O15123 496 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 HCRTR2O43614 444 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 KIAA0513O60268 411 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 C1QCP02747 245 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 CHMP24386 653 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 ZNF41P51814 821 aaPredicted RBP18.02■□□□□ 0.48
DDR1-259ENST00000507046 GFRA1P56159 465 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 ADORA2A-AS1P86434 159 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 FUT5Q11128 374 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 SF3A3Q12874 501 aaKnown RBP eCLIP18.02■□□□□ 0.489e-7■■■■□ 24.7
DDR1-259ENST00000507046 ZNF141Q15928 474 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 COX20Q5RI15 118 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 PDZK1Q5T2W1 519 aa18.02■□□□□ 0.48
DDR1-259ENST00000507046 LRIF1Q5T3J3 769 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms