RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GRAMD1BQ3KR37 738 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GALNTL6Q49A17 601 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GTF2IRD2BQ6EKJ0 949 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GTF2IRD2Q86UP8 949 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GTPBP8Q8N3Z3 284 aaPredicted RBP13□□□□□ -0.33
HMGCS1-203ENST00000507004 ZNF527Q8NB42 609 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 OR56A1Q8NGH5 318 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 NRGNQ92686 78 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 CIDECQ96AQ7 238 aaPredicted RBP13□□□□□ -0.33
HMGCS1-203ENST00000507004 STARD4Q96DR4 205 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 GIMAP5Q96F15 307 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 PGM2Q96G03 612 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 BTBD2Q9BX70 525 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 PRRG4Q9BZD6 226 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 PIGUQ9H490 435 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 ZCCHC3Q9NUD5 404 aaKnown RBP13□□□□□ -0.33
HMGCS1-203ENST00000507004 BEX4Q9NWD9 120 aaPredicted RBP13□□□□□ -0.33
HMGCS1-203ENST00000507004 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
HMGCS1-203ENST00000507004 PROCRQ9UNN8 238 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 PLEKHA6Q9Y2H5 1048 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 EMC9Q9Y3B6 208 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 TESMINQ9Y4I5 508 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 HIVEP1P15822 2718 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
HMGCS1-203ENST00000507004 A0A1W2PRB8 838 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 GXYLT2A0PJZ3 443 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PIP5K1BO14986 540 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 KCNK2O95069 426 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 POU2F1P14859 743 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PPP3CBP16298 524 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PRPS1L1P21108 318 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 TCEA1P23193 301 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 SUMO3P55854 103 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 CLDN15P56746 228 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 RAC1P63000 192 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 POU6F2P78424 691 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PON3Q15166 354 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 SMU1Q2TAY7 513 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 DEFB113Q30KQ7 82 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 UGT3A2Q3SY77 523 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 ZNF385BQ569K4 471 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 XKR7Q5GH72 579 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 CPTPQ5TA50 214 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 ANKRD26P1Q6NSI1 321 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 FAM214BQ7L5A3 538 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 LRRN4CLQ8ND94 238 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PSMA8Q8TAA3 256 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 TCP10LQ8TDR4 215 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 FIG4Q92562 907 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PIK3R3Q92569 461 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PLEKHF2Q9H8W4 249 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 FLRT3Q9NZU0 649 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 BAIAP2L1Q9UHR4 511 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 FAF1Q9UNN5 650 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PTGDR2Q9Y5Y4 395 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 TACC2O95359 2948 aa12.99□□□□□ -0.33
HMGCS1-203ENST00000507004 PRRC2AP48634 2157 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 GJE1A6NN92 205 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 B4DXG7 233 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 C16orf97H3BN30 126 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ATE1O95260 518 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 SYNGR4O95473 234 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 CHRNGP07510 517 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ACP2P11117 423 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 IL11P20809 199 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ELK4P28324 431 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ADH6P28332 368 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 KIR2DL2P43627 348 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 SUCLG1P53597 346 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 TP53BP2Q13625 1128 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 DUSP5Q16690 384 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 CDC73Q6P1J9 531 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 WDR93Q6P2C0 686 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 EXOC3L1Q86VI1 746 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 SLC16A11Q8NCK7 471 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 OR6K3Q8NGY3 331 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 OR4C3Q8NH37 302 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 FNDC9Q8TBE3 224 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 SFXN5Q8TD22 340 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ADAMTS15Q8TE58 950 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 JADE3Q92613 823 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ARL8AQ96BM9 186 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 FAM120BQ96EK7 910 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 GMPPAQ96IJ6 420 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 TMEM109Q9BVC6 243 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ACTRT3Q9BYD9 372 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 RTN4RQ9BZR6 473 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 BHLHE41Q9C0J9 482 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 ANKZF1Q9H8Y5 726 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 TIGARQ9NQ88 270 aa12.98□□□□□ -0.33
HMGCS1-203ENST00000507004 DUXAA6NLW8 204 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 EIF1AYO14602 144 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 ADAMDEC1O15204 470 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms