RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PLPP2O43688 288 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 NTN1O95631 604 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TBX6O95947 436 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CTSAP10619 480 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC11A1P49279 550 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 PRLHRP49683 370 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TAS2R41P59536 307 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 EIF2B5Q13144 721 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CEACAM19Q7Z692 300 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SPICQ8N5J4 248 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 BVESQ8NE79 360 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM71CQ8NEG0 241 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TIFAQ96CG3 184 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC22A12Q96S37 553 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 ZNF416Q9BWM5 594 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TMPRSS13Q9BYE2 586 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CHIAQ9BZP6 476 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC6A15Q9H2J7 730 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 ZDHHC6Q9H6R6 413 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 NANSQ9NR45 359 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 PFDN2Q9UHV9 154 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 FLVCR2Q9UPI3 526 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 MRPS7Q9Y2R9 242 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 LGALS8O00214 317 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CTDSPLO15194 276 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CHRM4P08173 479 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 FPR3P25089 353 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 STAT5AP42229 794 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 PLD1Q13393 1074 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 TRAM2Q15035 370 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 TRAM1Q15629 374 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 ARL9Q6T311 187 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 Q6ZVL8 140 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CPOQ8IVL8 374 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 ANKRD53Q8N9V6 530 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 ABHD4Q8TB40 342 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SMIM4Q8WVI0 70 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 UBE2E3Q969T4 207 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC35G5Q96KT7 338 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CAMK1GQ96NX5 476 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 NKIRAS2Q9NYR9 191 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 AHSPQ9NZD4 102 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 HCSTQ9UBK5 93 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CLEC4AQ9UMR7 237 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CAMK2AQ9UQM7 478 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 KLF2Q9Y5W3 355 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 A0A1B0GUH1 482 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 MCRIP1C9JLW8 97 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 RTCAO00442 366 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 PGRMC2O15173 223 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SERPIND1P05546 499 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 RAB3AP20336 220 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 NFYAP23511 347 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 ATP5A1P25705 553 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 E2F1Q01094 437 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 METTL11BQ5VVY1 283 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 TMEM173Q86WV6 379 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 LILRB1Q8NHL6 650 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 PIGXQ8TBF5 258 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SCARB1Q8WTV0 552 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 RGMAQ96B86 450 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SIPA1Q96FS4 1042 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 GSDMCQ9BYG8 508 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 SEMA4GQ9NTN9 838 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 RNF186Q9NXI6 227 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CFAP97Q9P2B7 532 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 CA5BQ9Y2D0 317 aa15.96■□□□□ 0.15
SQSTM1-211ENST00000506690 GALR3O60755 368 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 GIPP09681 153 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 CCR8P51685 355 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 KIAA1024LP59773 190 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 FUT5Q11128 374 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 CLVS2Q5SYC1 327 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 FAM69AQ5T7M9 428 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 B3GNTL1Q67FW5 361 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 SLC8B1Q6J4K2 584 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 C22orf39Q6P5X5 142 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 HSD17B13Q7Z5P4 300 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 TRAM1L1Q8N609 369 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 OR4D9Q8NGE8 314 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 CNOT9Q92600 299 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 DIO2Q92813 273 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 EXOSC8Q96B26 276 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 PINK1Q9BXM7 581 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 PCDHB16Q9NRJ7 776 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 TRPC4Q9UBN4 977 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 TCRBV16S1A1N1A0A5B0 115 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 FAM183AA6NL82 134 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 E9PI62 339 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 AIPO00170 330 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 KLF4O43474 513 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 GMDSO60547 372 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 SAGP10523 405 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 RPL17P18621 184 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 RAB3BP20337 219 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 BSGP35613 385 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 GDNFP39905 211 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms