RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CGAP01215 116 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 OPN1LWP04000 364 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 FGF4P08620 206 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 LAMP1P11279 417 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 PRPS2P11908 318 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 IL11P20809 199 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 ETV4P43268 484 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 KIR2DL2P43627 348 aaPredicted RBP11.82□□□□□ -0.52
DDX41-204ENST00000504807 SLC6A8P48029 635 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 PRR5P85299 388 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 FAM27E3Q08E93 113 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 PTGR1Q14914 329 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 GUSBP1Q15486 140 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 DECR1Q16698 335 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 Q5PR19 223 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 RAET1LQ5VY80 246 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 MFSD12Q6NUT3 480 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 ZNF474Q6S9Z5 364 aaPredicted RBP11.82□□□□□ -0.52
DDX41-204ENST00000504807 BTLAQ7Z6A9 289 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 GRAMD2AQ8IUY3 354 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 DDIASQ8IXT1 998 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 KRTCAP2Q8N6L1 136 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 NUP43Q8NFH3 380 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 GPR151Q8TDV0 419 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 FAM120BQ96EK7 910 aaKnown RBP11.82□□□□□ -0.52
DDX41-204ENST00000504807 TM9SF2Q99805 663 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 OPN3Q9H1Y3 402 aaPredicted RBP11.82□□□□□ -0.52
DDX41-204ENST00000504807 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 Q9N2J8 555 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 SH3BP4Q9P0V3 963 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 ABCG2Q9UNQ0 655 aa11.82□□□□□ -0.52
DDX41-204ENST00000504807 WBP11Q9Y2W2 641 aaKnown RBP11.82□□□□□ -0.52
DDX41-204ENST00000504807 NPIPA5A0A0B4J1W7 369 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 NPIPA7E9PJI5 369 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 ARHGEF9O43307 516 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 ITM2AO43736 263 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 NPHS1O60500 1241 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 KCNK2O95069 426 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 HRGP04196 525 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 IFI6P09912 130 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 NPIPA8P0DM63 369 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 EPXP11678 715 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 PSMA4P25789 261 aaKnown RBP11.81□□□□□ -0.52
DDX41-204ENST00000504807 SHC1P29353 583 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 NAA20P61599 178 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 SIRPAP78324 504 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 SORDQ00796 357 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 BCL2A1Q16548 175 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 CTU2Q2VPK5 515 aaKnown RBP11.81□□□□□ -0.52
DDX41-204ENST00000504807 FNDC9Q8TBE3 224 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 POC1BQ8TC44 478 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
DDX41-204ENST00000504807 METTL2AQ96IZ6 378 aaKnown RBP11.81□□□□□ -0.52
DDX41-204ENST00000504807 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 Q96MF0 132 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 TRMOQ9BU70 441 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 PINK1Q9BXM7 581 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 C20orf27Q9GZN8 174 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 CXorf36Q9H7Y0 433 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 ATP6V1HQ9UI12 483 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 VDAC3Q9Y277 283 aa11.81□□□□□ -0.52
DDX41-204ENST00000504807 SLC22A20A6NK97 555 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 EFNA2O43921 213 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 SLU7O95391 586 aaKnown RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 F12P00748 615 aaPredicted RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 C1QCP02747 245 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 GPC1P35052 558 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 MANFP55145 182 aaKnown RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 PSPHP78330 225 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 MPP2Q14168 576 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 PON3Q15166 354 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 NDUFAF6Q330K2 333 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX41-204ENST00000504807 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 SZRD1Q7Z422 152 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 P3H2Q8IVL5 708 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 RIMKLAQ8IXN7 391 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 CLEC4FQ8N1N0 589 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 SMPDL3BQ92485 455 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 CDS1Q92903 461 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 ADGRG7Q96K78 797 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 MS4A4EQ96PG1 132 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 SERHL2Q9H4I8 314 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 RNF122Q9H9V4 155 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 ACSS1Q9NUB1 689 aaPredicted RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 FOXD3Q9UJU5 478 aaPredicted RBP11.8□□□□□ -0.52
DDX41-204ENST00000504807 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 TESMINQ9Y4I5 508 aa11.8□□□□□ -0.52
DDX41-204ENST00000504807 CENPVL1A0A0U1RR11 272 aa11.79□□□□□ -0.52
DDX41-204ENST00000504807 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
DDX41-204ENST00000504807 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
DDX41-204ENST00000504807 TRIM64BA6NI03 449 aa11.79□□□□□ -0.52
DDX41-204ENST00000504807 ALG1L2C9J202 215 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms