RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LSSP48449 732 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 EFR3AQ14156 821 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 MFSD6LQ8IWD5 586 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 CYB561A3Q8NBI2 242 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 OR51L1Q8NGJ5 315 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 GPR148Q8TDV2 347 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF175Q9Y473 711 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 IER3IP1Q9Y5U9 82 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 A6NHS1 94 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 ACOT7O00154 380 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 MMP2P08253 660 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 PTH2RP49190 550 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 TP53I3Q53FA7 332 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 PAQR9Q6ZVX9 377 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 PXKQ7Z7A4 578 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 OR14L1PQ8NHC6 308 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 ADAMTS16Q8TE57 1224 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 SYT3Q9BQG1 590 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 DPCDQ9BVM2 203 aaPredicted RBP15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 C1QTNF2Q9BXJ5 285 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 FAM86C1Q9NVL1 165 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 OPRL1P41146 370 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 EIF2B1Q14232 305 aaKnown RBP15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 GTF2H4Q92759 462 aa15.57■□□□□ 0.08
PCDHA1-203ENST00000504120 BLACEA4D250 179 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 BOLA2-SMG1P6H3BVE0 249 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SGK494L7N484 410 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 UPK1BO75841 260 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 IRF4Q15306 451 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 PRAMEF8Q5VWM4 474 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 PRAMEF7Q5VXH5 474 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 FCRLBQ6BAA4 426 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 MRPL43Q8N983 215 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CHPT1Q8WUD6 406 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SPTSSAQ969W0 71 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 FAIMQ9NVQ4 179 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 A0A0A6YYC8 382 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 NAP1L6A6NFF2 107 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 I3L1I5 382 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 TMEM225BP0DP42 221 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 HIST1H1TP22492 207 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 OTX2P32243 289 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 PBX2P40425 430 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 TRNP1Q6NT89 227 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SPRYD4Q8WW59 207 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CDS1Q92903 461 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 MYADMQ96S97 322 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SAP130Q9H0E3 1048 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF226Q9NYT6 803 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 KCMF1Q9P0J7 381 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 BRINP1O60477 761 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 IFNGR1P15260 489 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CHMP24386 653 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CPOXP36551 454 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 EIF2S3LQ2VIR3 472 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 GGTA1PQ4G0N0 100 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 HMBOX1Q6NT76 420 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 DRAXINQ8NBI3 349 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 PHOSPHO2Q8TCD6 241 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 UBXN10Q96LJ8 280 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 LMF2Q9BU23 707 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 EEF1E1-BLOC1S5C9J1V9 151 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 FRS3O43559 492 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 UBE2NP61088 152 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 DEFB103AP81534 67 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CNIH2Q6PI25 160 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF765Q7L2R6 523 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 OR6Q1Q8NGQ2 317 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SLC7A13Q8TCU3 470 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 NANOS1Q8WY41 292 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 LMF1Q96S06 567 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 TSNAXQ99598 290 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 ZFP57Q9NU63 452 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 KCNIP1Q9NZI2 227 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 NCDNQ9UBB6 729 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SRPK3Q9UPE1 567 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 SLC6A5Q9Y345 797 aa15.56■□□□□ 0.08
PCDHA1-203ENST00000504120 CDK2P24941 298 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 GALNT6Q8NCL4 622 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 BPIFA2Q96DR5 249 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 CDC6Q99741 560 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ACSS1Q9NUB1 689 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 B3GNT3Q9Y2A9 372 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ANKRD28O15084 1053 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ATG12O94817 140 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 IFNA1P01562 189 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 SOX3P41225 446 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 VEGFBP49765 207 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 GLO1Q04760 184 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 MLC1Q15049 377 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 KCTD11Q693B1 232 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 MSANTD3Q96H12 275 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 CRB3Q9BUF7 120 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 PCDHGA8Q9Y5G5 932 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF691Q5VV52 312 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 FAM83HQ6ZRV2 1179 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF534Q76KX8 674 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 MCATQ8IVS2 390 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms