RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 ZIM2Q9NZV7 527 aa4.73□□□□□ -1.65
SCFD2-203ENST00000503450 DCTN4Q9UJW0 460 aa4.73□□□□□ -1.65
SCFD2-203ENST00000503450 CBLCQ9ULV8 474 aa4.73□□□□□ -1.65
SCFD2-203ENST00000503450 KCNE3Q9Y6H6 103 aa4.73□□□□□ -1.65
SCFD2-203ENST00000503450 CAPN7Q9Y6W3 813 aa4.73□□□□□ -1.65
SCFD2-203ENST00000503450 NUP214P35658 2090 aaPredicted RBP4.73□□□□□ -1.65
SCFD2-203ENST00000503450 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 DOCK7Q96N67 2140 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MTORP42345 2549 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 C15orf38-AP3S2A0A0A6YYH1 394 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 A0A0G2JND7 137 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RNF103-CHMP3A0A140T963 221 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PRSS51A0A1B0GVH4 220 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 FAM234BA2RU67 622 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PRAMEF27A3QJZ7 478 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MBD3L4A6NDZ8 208 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MBD3L3A6NE82 208 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MBD3L5A6NJ08 208 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 FIGNL2A6NMB9 653 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 C9JVG2 144 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 NPIPB9F8W1W9 429 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 H0YC42 278 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CFLARO15519 480 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 HNRNPRO43390 633 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 HCRTR2O43614 444 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SCO2O43819 266 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 WDR1O75083 606 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SLC22A3O75751 556 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 KCNK2O95069 426 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 UTS2O95399 124 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OXSR1O95747 527 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 IL6P05231 212 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PGRP06401 933 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SNRPB2P08579 225 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 VIMP08670 466 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 KRT16P08779 473 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ESRRAP11474 423 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 NID1P14543 1247 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CPN1P15169 458 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CD1EP15812 388 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ZNF708P17019 499 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PSMA4P25789 261 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ELAVL4P26378 380 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MSX1P28360 303 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 IL12AP29459 219 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CHRNB4P30926 498 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SRD5A2P31213 254 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 GABRA3P34903 492 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ZFP36L2P47974 494 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MASP1P48740 699 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PRIM2P49643 509 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 STARP49675 285 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 POLR2JP52435 117 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SMSP52788 366 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PNLIPRP2P54317 469 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CASP6P55212 293 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 TPD52P55327 224 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CLDN18P56856 261 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 HBA1P69905 142 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RPP38P78345 283 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 FUT5Q11128 374 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 FOXF2Q12947 444 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 TP53BP2Q13625 1128 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 EFR3AQ14156 821 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RCAN2Q14206 197 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SQLEQ14534 574 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 LASP1Q14847 261 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 GRAMD1BQ3KR37 738 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 VPS26BQ4G0F5 336 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CYP27C1Q4G0S4 372 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 TIGD2Q4W5G0 525 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RIPPLY2Q5TAB7 128 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CGB2Q6NT52 195 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ZCCHC12Q6PEW1 402 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 BHLHB9Q6PI77 547 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OLIG3Q7RTU3 272 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 YTHDF3Q7Z739 585 aaKnown RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 GALNT10Q86SR1 603 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ANKRD46Q86W74 232 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 PLCZ1Q86YW0 608 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 EGFL6Q8IUX8 553 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MCEMP1Q8IX19 187 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CLEC4FQ8N1N0 589 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CDRT4Q8N9R6 151 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 TNIP2Q8NFZ5 429 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR4A15Q8NGL6 344 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR5M1Q8NGP8 315 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR9I1Q8NGQ6 314 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR1J4Q8NGS1 313 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR4C3Q8NH37 302 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 MBD3L2Q8NHZ7 208 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 BCAS4Q8TDM0 211 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RND1Q92730 232 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 SARAFQ96BY9 339 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 RMND5BQ96G75 393 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 CCDC115Q96NT0 180 aa4.72□□□□□ -1.65
SCFD2-203ENST00000503450 ZNF317Q96PQ6 595 aaPredicted RBP4.72□□□□□ -1.65
SCFD2-203ENST00000503450 OR52E6Q96RD3 313 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms