RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ETV6P41212 452 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 POU6F2P78424 691 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 CD300LFQ8TDQ1 290 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 DCLRE1CQ96SD1 692 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEM38AQ9H6F2 299 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 MED17Q9NVC6 651 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 NPIPB15A6NHN6 443 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 H0YIV9 168 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 LEFTY1O75610 366 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 FARS2O95363 451 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 MAPK14Q16539 360 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 PGGHGQ32M88 737 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 FAM180BQ6P0A1 224 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 ALKAL2Q6UX46 152 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 GSG1LQ6UXU4 331 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 RNF175Q8N4F7 328 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 OR6N2Q8NGY6 317 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 SLC2A4RGQ9NR83 387 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 SPATA6Q9NWH7 488 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 ASB6Q9NWX5 421 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEFF2Q9UIK5 374 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 hCG_1807616A0A1W2PRN6 198 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 MAT2AP31153 395 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 GRK5P34947 590 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 PRSS3P35030 304 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 FXYD6P3P58550 94 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 CHRNEQ04844 493 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF805Q5CZA5 627 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 IL20RBQ6UXL0 311 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 APCDD1Q8J025 514 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF527Q8NB42 609 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 IL17FQ96PD4 163 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 SRRQ9GZT4 340 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF334Q9HCZ1 680 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 GSKIPQ9P0R6 139 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 RCE1Q9Y256 329 aa16.22■□□□□ 0.19
HMGXB3-201ENST00000502717 HHLA1C9JL84 531 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 RAF1P04049 648 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 SOD2P04179 222 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 DBIP07108 87 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 MRPL19P49406 292 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 TSPAN31Q12999 210 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 ITPRIPL2Q3MIP1 535 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 MPP7Q5T2T1 576 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 OR52E2Q8NGJ4 325 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 GPR62Q9BZJ7 368 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 CXCL16Q9H2A7 254 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 Q9N2J8 555 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 RXFP3Q9NSD7 469 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 H3BSH0 61 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 UBBP0CG47 229 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 UBCP0CG48 685 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 ADH6P28332 368 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 RPS27AP62979 156 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 UBA52P62987 128 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 MGAT3Q09327 533 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 C1orf189Q5VU69 101 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 MCEMP1Q8IX19 187 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 SVBPQ8N300 66 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 TCTEX1D2Q8WW35 142 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 LRIG1Q96JA1 1093 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 SAGE1Q9NXZ1 904 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 PGAP2Q9UHJ9 254 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 CSF3P09919 207 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 PRR35P0CG20 571 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 IGFALSP35858 605 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 MEPCEQ7L2J0 689 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 NUP54Q7Z3B4 507 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 ADGRF3Q8IZF5 1079 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 HMGCLL1Q8TB92 370 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 SMPDL3BQ92485 455 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 NECAB3Q96P71 396 aaPredicted RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEM43Q9BTV4 400 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 COPS3Q9UNS2 423 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 ABCA11PQ4W5N1 156 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF454Q8N9F8 522 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 KCT2Q8NC54 265 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 WDR20Q8TBZ3 569 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 PFDN5Q99471 154 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 RHNO1Q9BSD3 238 aa16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 C14orf166Q9Y224 244 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-201ENST00000502717 POM121CA8CG34 1229 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 CXCR1P25024 350 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 HOXD9P28356 352 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 KCNJ10P78508 379 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 RNASE10Q5GAN6 216 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 DNM1P34Q6PK57 102 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 HORMAD2Q8N7B1 307 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 WASH6PQ9NQA3 447 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 C9J4A7 227 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 AMY2AP04746 511 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PGDP52209 483 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 KCTD20Q7Z5Y7 419 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 AUTS2Q8WXX7 1259 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 IGSF21Q96ID5 467 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 TCEAL7Q9BRU2 100 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 C1QTNF2Q9BXJ5 285 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms