RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 C19orf53Q9UNZ5 99 aaPredicted RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TRAPPC13A5PLN9 417 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 UNC119BA6NIH7 251 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 PTP4A3O75365 173 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TPPPO94811 219 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 IGF2P01344 180 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ATP1B1P05026 303 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 SERPIND1P05546 499 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 F8A1P23610 371 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 CERS1P27544 350 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 APEX1P27695 318 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 RBM34P42696 430 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 DGKEP52429 567 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 POU4F2Q12837 409 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 CST6Q15828 149 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TATDN3Q17R31 274 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ZSWIM7Q19AV6 140 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 CXXC5Q7LFL8 322 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 OAFQ86UD1 273 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 NR2C2APQ86WQ0 139 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ZNF619Q8N2I2 560 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 FBXL6Q8N531 539 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 NEIL3Q8TAT5 605 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ENKURQ8TC29 256 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 SUSD6Q92537 303 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 SCMH1Q96GD3 660 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 BABAM2Q9NXR7 383 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 GDE1Q9NZC3 331 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 PRKAB1Q9Y478 270 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 COL5A1P20908 1838 aaPredicted RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ARPC4-TTLL3A0A0A6YYG9 625 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ZNF780AO75290 641 aaPredicted RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 DBIP07108 87 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TAB1Q15750 504 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TRIQKQ629K1 86 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 C18orf63Q68DL7 685 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 ZNF613Q6PF04 617 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 FAM111BQ6SJ93 734 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 LINC00114Q6XXX2 140 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 PLEKHM3Q6ZWE6 761 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 OR9A2Q8NGT5 310 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 OIT3Q8WWZ8 545 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 OTUB1Q96FW1 271 aaPredicted RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 MCHR1Q99705 422 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TMEM246Q9BRR3 403 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 CNIH4Q9P003 139 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 TNFRSF10DQ9UBN6 386 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 NUFIP1Q9UHK0 495 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 SERTAD3Q9UJW9 196 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 PILRAQ9UKJ1 303 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 RBMX2Q9Y388 322 aaKnown RBP6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 NPFFR2Q9Y5X5 522 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 STON1Q9Y6Q2 735 aa6.72□□□□□ -1.33
LYSMD3-203ENST00000500869 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 CDC42EP2O14613 210 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 CASKO14936 926 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ORC5O43913 435 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PRKRAO75569 313 aaKnown RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PRKCAP17252 672 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 AZGP1P25311 298 aaKnown RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 CTNNB1P35222 781 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 EPHA4P54764 986 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ACTC1P68032 377 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ACTA1P68133 377 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 FHL1Q13642 323 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ISXQ2M1V0 245 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 MANEAQ5SRI9 462 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 DMKNQ6E0U4 476 aaPredicted RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 LAMTOR1Q6IAA8 161 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PLET1Q6UQ28 207 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 C2orf73Q8N5S3 287 aaPredicted RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ACBD7Q8N6N7 88 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 OR7G2Q8NG99 324 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 OR4F15Q8NGB8 312 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 HERVK_113Q902F9 699 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PHYHIPQ92561 330 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PGLYRP3Q96LB9 341 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 PLEKHA1Q9HB21 404 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 EMC7Q9NPA0 242 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 RPRD1BQ9NQG5 326 aaKnown RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 CXXC1Q9P0U4 656 aaPredicted RBP6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 ZNF780BQ9Y6R6 833 aa6.71□□□□□ -1.33
LYSMD3-203ENST00000500869 A6NCN8 305 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 CPSF4LA6NMK7 179 aaKnown RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 OGG1O15527 345 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 CHRM5P08912 532 aaPredicted RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 NID1P14543 1247 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 TYRP1P17643 537 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 HTR2AP28223 471 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 IGFALSP35858 605 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 RGS8P57771 180 aaPredicted RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 RPS21P63220 83 aaKnown RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 PLAURQ03405 335 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 MXD1Q05195 221 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 P2RY14Q15391 338 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 PRPF38BQ5VTL8 546 aaKnown RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 RANBP3LQ86VV4 465 aaPredicted RBP6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 NRMQ8IXM6 262 aa6.71□□□□□ -1.34
LYSMD3-203ENST00000500869 CCDC116Q8IYX3 515 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms