RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 UGT2B17O75795 530 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 IL7RP16871 459 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 RPS4Y1P22090 263 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 NME2P22392 152 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 ME2P23368 584 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 MASP1P48740 699 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 DNASE1L1P49184 302 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 PCBP3P57721 371 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 VEZF1Q14119 521 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 YTHDF3Q7Z739 585 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 VRK2Q86Y07 508 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 ARMC8Q8IUR7 673 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 TMEM178AQ8NBL3 297 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 OR4C3Q8NH37 302 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 OR52P1PQ8NH57 321 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 HAS2Q92819 552 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF597Q96LX8 424 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 JSRP1Q96MG2 331 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 SECISBP2Q96T21 854 aaKnown RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 HOXD1Q9GZZ0 328 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 SAP130Q9H0E3 1048 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 PCDHAC1Q9H158 963 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 CNIH4Q9P003 139 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 LUZP4Q9P127 313 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 PPP4R1LQ9P1A2 415 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 CD300AQ9UGN4 299 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 KCNE5Q9UJ90 142 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 TUBD1Q9UJT1 453 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 WIF1Q9Y5W5 379 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 SNX13Q9Y5W8 968 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 GPC6Q9Y625 555 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-227ENST00000498056 KIAA1549Q9HCM3 1950 aa12.43□□□□□ -0.42
CPNE1-227ENST00000498056 CACNA1BQ00975 2339 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 C17orf51A8MQB3 221 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 H3BNH8 94 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 CDK2AP1O14519 115 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 GSC2O15499 205 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 NDUFB5O43674 189 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 FADS1O60427 444 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SERPINB7O75635 380 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 CYP7B1O75881 506 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 STAMBPO95630 424 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ANGPTL1O95841 491 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SP1P08047 785 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 NGFRP08138 427 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 GUSBP08236 651 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 PABPC4LP0CB38 370 aaKnown RBP12.42□□□□□ -0.42
CPNE1-227ENST00000498056 UBL4AP11441 157 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ETS2P15036 469 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 GGT1P19440 569 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ATP6V1B2P21281 511 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 TBXA2RP21731 343 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 CASP3P42574 277 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 CCR4P51679 360 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF169Q14929 603 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-227ENST00000498056 LARS2Q15031 903 aaKnown RBP12.42□□□□□ -0.42
CPNE1-227ENST00000498056 CD226Q15762 336 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF141Q15928 474 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 MAPK14Q16539 360 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 NDUFAF6Q330K2 333 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SPATS1Q496A3 300 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 TBCELQ5QJ74 424 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF836Q6ZNA1 936 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 ASRGL1Q7L266 308 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 MARCH3Q86UD3 253 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 PHOSPHO1Q8TCT1 267 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 TAMM41Q96BW9 452 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SCMH1Q96GD3 660 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SH3YL1Q96HL8 342 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-227ENST00000498056 SH2D2AQ9NP31 389 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 DTNAQ9Y4J8 743 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 V9GYQ6 96 aa12.42□□□□□ -0.42
CPNE1-227ENST00000498056 A0A1W2PQD3 144 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ALG1L2C9J202 215 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 GNB5O14775 395 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF682O95780 498 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 SERPINA1P01009 418 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 CSTAP01040 98 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 THBS1P07996 1170 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 UBTFL6P0CB48 400 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 NID1P14543 1247 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 RFC3P40938 356 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 PTGDSP41222 190 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 MEOX1P50221 254 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 LY6DQ14210 128 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ITPR1Q14643 2758 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 MRPL2Q5T653 305 aaKnown RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 RNF220Q5VTB9 566 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms