RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SLCO1B1Q9Y6L6 691 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 CDH10Q9Y6N8 788 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 IGHV1OR15-1A0A075B7D0 117 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 A0A0U1RQG5 324 aaPredicted RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 TMEM89A2RUT3 159 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 OAS2P29728 719 aaKnown RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 ATP5DP30049 168 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 AXLP30530 894 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 RPL4P36578 427 aaKnown RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 CASP3P42574 277 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 SLC6A8P48029 635 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 RND3P61587 244 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 VLDLRP98155 873 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 PPP1R8Q12972 351 aaKnown RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 EIF4EBP1Q13541 118 aaPredicted RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 C16orf72Q14CZ0 275 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 KARSQ15046 597 aaKnown RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 SLC10A5Q5PT55 438 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 FAM120AOSQ5T036 256 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 IYDQ6PHW0 289 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 DNM1P46Q6ZS02 220 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 TOM1L2Q6ZVM7 507 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 P4HA3Q7Z4N8 544 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 LRRC17Q8N6Y2 441 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 OR9A4Q8NGU2 314 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 NEIL3Q8TAT5 605 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 BLOC1S5Q8TDH9 187 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 DESI2Q9BSY9 194 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 C2orf40Q9H1Z8 148 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 VCXQ9H320 206 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 CAB39LQ9H9S4 337 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 NANSQ9NR45 359 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 RBM28Q9NW13 759 aaKnown RBP1.85□□□□□ -2.11
VPS26A-208ENST00000497022 COMMD8Q9NX08 183 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 PSG11Q9UQ72 335 aa1.85□□□□□ -2.11
VPS26A-208ENST00000497022 NUP214P35658 2090 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-208ENST00000497022 PIKFYVEQ9Y2I7 2098 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 A0A0U1RRA0 63 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 TTC26A0AVF1 554 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 PSMB11A5LHX3 300 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 LRCOL1A6NCL2 159 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ZSCAN5BA6NJL1 495 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 FAM166BA8MTA8 275 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 EFNA2O43921 213 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 FMO6PO60774 539 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ICOSLGO75144 302 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 IGHV4-34P06331 123 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 NTSP30990 170 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 KIR2DS2P43631 304 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 HNRNPFP52597 415 aaKnown RBP1.84□□□□□ -2.11
VPS26A-208ENST00000497022 LIM2P55344 173 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 MORF4L2Q15014 288 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 CDC37Q16543 378 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-208ENST00000497022 CARTPTQ16568 116 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 CFAP221Q4G0U5 840 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 AGKQ53H12 422 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 OLFM4Q6UX06 510 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 IFNEQ86WN2 208 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 IQCA1Q86XH1 822 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 SFRP1Q8N474 314 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ARFGAP2Q8N6H7 521 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF713Q8N859 430 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-208ENST00000497022 OR9A1PQ8NGU1 263 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 PSMA8Q8TAA3 256 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ADIPOR1Q96A54 375 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 DTD2Q96FN9 168 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF560Q96MR9 790 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 MBOAT4Q96T53 435 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 COQ7Q99807 217 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 NARFLQ9H6Q4 476 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 KAT8Q9H7Z6 458 aaKnown RBP1.84□□□□□ -2.11
VPS26A-208ENST00000497022 HOMER3Q9NSC5 361 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 IFT52Q9Y366 437 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 WDR45Q9Y484 360 aa1.84□□□□□ -2.11
VPS26A-208ENST00000497022 GAKO14976 1311 aa1.84□□□□□ -2.12
VPS26A-208ENST00000497022 TET2Q6N021 2002 aaPredicted RBP1.83□□□□□ -2.12
VPS26A-208ENST00000497022 SMIM28A0A1B0GU29 152 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 ALOX15BO15296 676 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 ZNF264O43296 627 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 NPIPB7O75200 414 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 HPDP32754 393 aaPredicted RBP1.83□□□□□ -2.12
VPS26A-208ENST00000497022 GCKP35557 465 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 PMELP40967 661 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 ZNF674Q2M3X9 581 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 PAQR9Q6ZVX9 377 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 CCDC91Q7Z6B0 441 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 SKA3Q8IX90 412 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 LEMD2Q8NC56 503 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 MDS2Q8NDY4 140 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 NACA2Q9H009 215 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 ZDHHC11Q9H8X9 412 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 NECAP2Q9NVZ3 263 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 GALPQ9UBC7 116 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 GMPPBQ9Y5P6 360 aa1.83□□□□□ -2.12
VPS26A-208ENST00000497022 DHX29Q7Z478 1369 aaKnown RBP1.83□□□□□ -2.12
VPS26A-208ENST00000497022 CABIN1Q9Y6J0 2220 aa1.82□□□□□ -2.12
VPS26A-208ENST00000497022 A6NDX4 124 aa1.82□□□□□ -2.12
VPS26A-208ENST00000497022 H0YL77 283 aa1.82□□□□□ -2.12
VPS26A-208ENST00000497022 TRIM3O75382 744 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms